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Domain assignment for NP_001099676.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001099676.1.4139
Domain Number 1 Region: 233-271
Classification Level Classification E-value
Superfamily F-box domain 0.0000733
Family F-box domain 0.0096
Further Details:      
 
Weak hits

Sequence:  NP_001099676.1.4139
Domain Number - Region: 336-392
Classification Level Classification E-value
Superfamily RING/U-box 0.000371
Family RING finger domain, C3HC4 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001099676.1.4139
Sequence length 418
Comment F-box only protein 5 [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MSRRACGDLPRPSSCLCPLDARTTVDGCKEESPVLSVTMKCFNCNPDLLELEVVKTEDSG
REGSYSPVCLEPSCDNCVGNHERLSFVESPIVGHDNKENQRVQNILDSSKEVEELEASRL
YEDSGYSSFIQSDSDDGILILENFRNSSQAHLLLSSQSPDQHPNKNLLPALHFERVVCST
LKKNGKRNSKVDQEMLKEVIASGNITLQNIIGKKMGLEHLDILAELSRRGCMHLLANIFM
KLSGMDLINLSKVSRIWKKILESDKGAFQQYSKAMQRVIESNKLSLHASTRGYVVGRTAL
TCVQKSSTWAPPKNVQPSQRGQRGSVYSRHNEFLEVAKTLKNNESLKACVRCNFPAKYDH
YLERAVCKRESCKFEYCTKCLCAYHNNKDCLNSKNLKASCKMGPLPGTKKSKKNLQRL
Download sequence
Identical sequences B0BNA4
ENSRNOP00000034853 ENSRNOP00000034853 10116.ENSRNOP00000034853 NP_001099676.1.100692 NP_001099676.1.4139

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