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Domain assignment for NP_001099782.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001099782.1.100692
Domain Number 1 Region: 543-648
Classification Level Classification E-value
Superfamily SRCR-like 1.57e-43
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0000873
Further Details:      
 
Domain Number 2 Region: 779-884
Classification Level Classification E-value
Superfamily SRCR-like 2.09e-38
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0001
Further Details:      
 
Domain Number 3 Region: 229-334
Classification Level Classification E-value
Superfamily SRCR-like 9.02e-34
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00075
Further Details:      
 
Domain Number 4 Region: 334-438
Classification Level Classification E-value
Superfamily SRCR-like 3.79e-33
Family Scavenger receptor cysteine-rich (SRCR) domain 0.001
Further Details:      
 
Domain Number 5 Region: 28-134
Classification Level Classification E-value
Superfamily SRCR-like 1.28e-30
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0018
Further Details:      
 
Domain Number 6 Region: 440-543
Classification Level Classification E-value
Superfamily SRCR-like 1.44e-29
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00052
Further Details:      
 
Domain Number 7 Region: 647-755
Classification Level Classification E-value
Superfamily SRCR-like 4.45e-26
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0022
Further Details:      
 
Domain Number 8 Region: 136-232
Classification Level Classification E-value
Superfamily SRCR-like 3.27e-16
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001099782.1.100692
Sequence length 995
Comment scavenger receptor family member expressed on T-cells 1 precursor [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MRTTLWTLSLGSLLTLRAALIGTSSEDGQGNLRLAHRQSKCDGVVLVRHQGEWGHLCNLE
WTLAEASVVCRQLGCGPAVGAPKYVPLPGEMVQPWLHNVSCWGNESSLWECSLGAWSQRA
CPHEWVVVALCANGTFREIRLVKGHSPCAGLPEIRNVNGVDRLCGLHVEEATVFCRELEC
GHALQAPRQDVGVSKYMTCKGTEPTIRNCRLNNKLRGGCNLLLDAEVVCSGHVEARLVGG
DHSCSGRLEVLRGLTWGTVCHADLDLPTAHVICRELGCGMAVSTLRGAQFGQGSGPVWLE
AFRCVGNESMLFHCPQEPGHHCGHNQDVALTCSEFRLVNGSSDCEGRVELQVQGAWAPLC
AANWDLADAMVLCHQLNCGNAVSIPPGGHFGDGDAPIWPDVFHCVGTEPHLLHCPASTLG
AHSCVLGNTASTICSGLQDTLRLRDGQSYCDGRVEISLNGSWGRVLDDIWDIRGASVVCR
QLECGEAQGAYDAPAPGFRTAPVGLSQVRCLGSETHLMQCNVSTSLLVPAATLRDAGVVC
SGSLRMRLAAGPGRCAGRVEVFYQGSWGTVCDDAWDLQDAQVVCRQLDCGHALSAPGNAH
FGAGTGRIWMDELHCLGNESLLWKCQSGNWGQHDCRHKEDAGVFCSESVALRLRGGTSGC
VGWLDVLYNGSWGAVCSNALRDISLSIMCRQLGCGDQGWLENRPSPGPGLGISWVDKIKC
RKLHNATLWQCPSAPWNPHSCTQEEEVWINCEGLPQIGSQEPAQTPNCSSPLGCLEDSVL
RVLGGEDGCSGRVELWHAGSWGTVCDDSWDLLDAQVVCRQLGCGQALAALEGAAFGPGMG
PVWLDEVECLGSEVTLEACQAELWGHGDCTHKEDAGVRCAGVSTTTALSPSLTPPPVAEA
WNLPEVACLVLGCLLGIVFLAMIAQWCHIRDASMGSGMLGNLQSDGVYEDIEVVPVMKKE
ENAISRLLMLEDGYDDAEEPEGQPTESEEECNGHC
Download sequence
Identical sequences D4AEN2
ENSRNOP00000045146 NP_001099782.1.100692 NP_001099782.1.4139 XP_017444486.1.100692

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