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Domain assignment for NP_001101256.1.100692 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001101256.1.100692
Domain Number 1 Region: 540-781
Classification Level Classification E-value
Superfamily VPS9 domain 3.14e-54
Family VPS9 domain 0.0011
Further Details:      
 
Domain Number 2 Region: 93-214
Classification Level Classification E-value
Superfamily SH2 domain 4.71e-17
Family SH2 domain 0.0015
Further Details:      
 
Domain Number 3 Region: 798-877
Classification Level Classification E-value
Superfamily Ubiquitin-like 0.0000101
Family Ras-binding domain, RBD 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001101256.1.100692
Sequence length 902
Comment ras and Rab interactor 2 [Rattus norvegicus]; AA=GCF_000001895.5; RF=representative genome; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=mixed; AL=Chromosome; RT=Major
Sequence
MSAWTMGARGLDKRGSFFKLIDTIASEIGELKREMVQTDVSLENGLEPSETYSMVRHKDG
GYPEDKDGKTCPRDSGYDSLSNRLSILDRLLHTHPIWLQLSLSEEEAAEVLQAQPPGIFL
VRKSSKMQKKVLSLRLPCEFGAPLKEFTIKESTYTFSLEGSGISFADLFRLIAFYCISRD
VLPFTLKLPYAISTAKTESQLEELAQLGLNFWSSSADNKPPNSPPPHRPLSSAGICPASL
RQLCLINGVHSIKTRTPSELECSQTNGALCFINPLFLKVHSQDLSTGPKRPSTRTPNANG
TERPRSPPPRPPPPAINSLHTSPGLSRTEPQTSMPETVHHSKHGNVALLGTKPTPIPPPR
LKKQASFLEAESSAKTLTACRPGRSPPEPELELEVEMGTAGHAGGAPPRDAPGDCTRAPP
PDSESQPPPCHGARQRLSDMSLSTSSSDSLEFDRSMPLYGYEADTTSSLEDYEGESDQET
MAPPIKSKKKRNSSFVLPKLVKSQLRKMSGVFSSFMTPEKRMVRRIAELSRDKCTYFGCL
VQDYVSFLKENKECHVSSTDMLQTIRQFMTQVKNYLSQSSELDPPIESLIPEDQIDVVLE
KAMHKCILKPLKGHVEAMLKDFHTADGSWKQLKENLQLVRQRNPQELGVFAPTPDLMELE
KIKLKFMTMQKMYSPEKKVMLLLRVCKLIYTVMENNSGRMYGADDFLPVLTYVIAQCDML
ELDTEIEYMMELLDPSLLHGEGGYYLTSAYGALSLIKNFQEEQAARLLSSEARDTLRQWH
KRRTTNRTIPSVDDFQNYLRVAFQEVNSGCTGKTLLVRPYITTEDVCQLCAEKFKVEDPE
EYSLFLFVDETWQQLAEDTYPQKIKAELHSRPQPHIFHFVYKRIKSDPYGVIFQNGDDLT
PS
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Identical sequences D4A6C4
ENSRNOP00000059327 10116.ENSRNOP00000059327 ENSRNOP00000059327 NP_001101256.1.100692 NP_001101256.1.4139 XP_006235204.1.100692 XP_006235205.1.100692 XP_006235208.1.100692 XP_006235209.1.100692 XP_008760492.1.100692 XP_008760493.1.100692 XP_017447252.1.100692 XP_017447253.1.100692 XP_017447254.1.100692

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