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Domain assignment for NP_001101589.1.4139 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  NP_001101589.1.4139
Domain Number - Region: 394-441
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 0.0166
Family Nuclear receptor ligand-binding domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001101589.1.4139
Sequence length 1106
Comment nck-associated protein 1-like [Rattus norvegicus]; AA=GCF_000002265.2; RF=na; TAX=10116; STAX=10116; NAME=Rattus norvegicus; strain=BN; Sprague-Dawley; AL=Chromosome; RT=Major
Sequence
MSLTSAYQHKLAEKLTILNDRGQGVLIRMYNIKKTCSDPKSKPPFLLEKSMESCLKYINK
KFPNIDVRNSTQHLGPVHREKAEIIRFLTNYYQSFVDVMEFRDHVYELLNTIDACQCHFD
INLNFDFTRSYLDLIVTYTSVILLLSRIEDRRLLIGMYNCAHEMLHGHGDPSFPRLGQMV
LEYDHPLKKLTEEFGPHTKAVSGALLSLYFLFVRRNQGAEQWRSAQLLSLISSPPAMINP
ANSDTMACEYLSVEVMERWIIIGFLLCHGCLNSNSQCQKLWKLCLEGSLYITLIREDVLQ
VHKVTEDLFSSLKGYSKRVADIKESKEHAITNSGQFHCQRRQFLRTAVKELETVLNDEPG
LLGPKALFAFMALSFIRDEVTWLVRHTENVTKTKTPEDYADSIAELLFLLEEIRALVRRH
IKVIQQYHLQYLARFDVLVLSDIIQNLTVCPEEESVIMSSFVSTLSSLNLKQVDNEEKFD
FSGLRLDWFRLQAYTSVAKAPLHLHENPDLAKVMNLIIFHSQMLDSVEKMLVETSDLSTF
CFHLRTFEKMFATTLEEPTMLRYTIAFPLICAHFVHCIHEMCPEEYPHLKNHGLHHCNSF
LEELAKQTSNCVLEICAEQRNLNEQLLPKHCATTISKAKNRKSMKQRQAPRKGEPERDKP
GAESHRKNRSLVTNMDKLHLNLTELALAMNHVHSFSVFEHTIFPSEYLSSHLESRLNRAI
VSLAGYNATTQEILRPSELLAGVKAYTSFIQSLAQFLGTDASRIVRNALLQQTQPLDSCG
EQTVTTLYTNWYLESLLRQASSGTIVLSPAMQAFISLPRDGEQNFSAEEFSDISEMRALA
EILGPYGMKFLSENLMWHVTSQIVELKKLVVENMDILVQIRSNFTKPELMASLLPQLTGA
ENVLKRMTIIGVILSFRAMAQEGLQEVTLSVFELACAAGVSCDIDPALVAAIANLKADNS
SPEEEYKVACLLLIFLAVSLPLLATDPSSFFSIEKDGYNNNIHCLTKAIIQVSAALFTLY
NKNIETHLKEFLVVASVSLLQLGQETDKLKTRNRESISLLMRLVVEESPFLTLDMLESCF
PYVLLRNAYREVSRAFYLNRLPASSH
Download sequence
Identical sequences D3Z8V4
NP_001101589.1.100692 NP_001101589.1.4139 ENSRNOP00000058936

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