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Domain assignment for NP_001124001.1.92730 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001124001.1.92730
Domain Number 1 Region: 15-106
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.37e-35
Family SCAN domain 0.0000614
Further Details:      
 
Domain Number 2 Region: 411-463
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000000000778
Family Classic zinc finger, C2H2 0.0052
Further Details:      
 
Domain Number 3 Region: 380-423
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000777
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 4 Region: 500-553
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000182
Family Classic zinc finger, C2H2 0.012
Further Details:      
 
Domain Number 5 Region: 196-247
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.0000000745
Family KRAB domain (Kruppel-associated box) 0.004
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001124001.1.92730
Sequence length 565
Comment zinc finger protein 496 isoform 2 [Mus musculus]; AA=GCF_000001635.25; RF=reference genome; TAX=10090; STAX=10090; NAME=Mus musculus; AL=Chromosome; RT=Patch
Sequence
MRSPPGENPSPQGEPPSPESSRRLFRRFRYQEAAGPREALQRLWELCRGWLRLERHTKEQ
ILELLVLEQFLAILPWEIQSWVRAQEPESGEQAVAAVEALEREPGRPWQWLKHCEDPVVI
DDGDGPAAPQDLEQERMSAESQSYPDAPPGALVQGTGLLSRSPGQPSEDLVPQDAFVVQE
QSIRDAQPVATCQLPPNRVSPFKDMILCFSEEDWSLLDPAQTGFYGEFIIGEDYAVSMPP
NEPPVQPGHSHEEENGLRVTEWTTDLQDKEIPQASCLDLSSLQPFQGEERRKWEELQVPE
LQPCPQVVLSQSPCPAGGDPPALKSSLDQEVTIEIVLSSSGDEDSQHSPYCTEELRSPPE
DLHSVPAHQSNASAEGEVQTSQKSYVCPNCGKIFRWRVNFIRHLRSRREQKPHKCSVCGE
LFSDSEDLDGHLETHEAQKPYRCTACGKSFRLNSHLISHRRIHLQPASQQPMKKSEEEAL
ETEGTGASDLLEKSKAKLSFQCGDCEKSFQRHDHLVRHRRHCHLKDETRPFQCRYCVKTF
RQNYDLLRHERLHMKRRSKQALNSY
Download sequence
Identical sequences NP_001124001.1.92730 XP_006533449.1.92730

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