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Domain assignment for NP_001136241.1.92137 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001136241.1.92137
Domain Number 1 Region: 717-823
Classification Level Classification E-value
Superfamily Cadherin-like 1.7e-24
Family Cadherin 0.0036
Further Details:      
 
Domain Number 2 Region: 622-729
Classification Level Classification E-value
Superfamily Cadherin-like 1.27e-22
Family Cadherin 0.0014
Further Details:      
 
Domain Number 3 Region: 509-625
Classification Level Classification E-value
Superfamily Cadherin-like 1.96e-21
Family Cadherin 0.002
Further Details:      
 
Domain Number 4 Region: 824-930
Classification Level Classification E-value
Superfamily Cadherin-like 3e-21
Family Cadherin 0.0011
Further Details:      
 
Domain Number 5 Region: 146-262
Classification Level Classification E-value
Superfamily Cadherin-like 1.57e-18
Family Cadherin 0.003
Further Details:      
 
Domain Number 6 Region: 932-1039
Classification Level Classification E-value
Superfamily Cadherin-like 4e-18
Family Cadherin 0.0017
Further Details:      
 
Domain Number 7 Region: 1144-1261
Classification Level Classification E-value
Superfamily Cadherin-like 2e-16
Family Cadherin 0.0017
Further Details:      
 
Domain Number 8 Region: 1044-1156
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000000143
Family Cadherin 0.0015
Further Details:      
 
Domain Number 9 Region: 394-521
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000000443
Family Cadherin 0.0065
Further Details:      
 
Domain Number 10 Region: 295-392
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000485
Family Cadherin 0.0044
Further Details:      
 
Weak hits

Sequence:  NP_001136241.1.92137
Domain Number - Region: 1447-1455
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.0238
Family Formin homology 2 domain (FH2 domain) 0.13
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001136241.1.92137
Sequence length 1790
Comment protocadherin-15 isoform CD2-1 precursor [Homo sapiens]; AA=GCF_000001405.37; RF=reference genome; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Patch
Sequence
MFRQFYLWTCLASGIILGSLFEICLGQYDDDWQYEDCKLARGGPPATIVAIDEESRNGTI
LVDNMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNSTGRVLDRDPPMNIHSIV
VQVQCINKKVGTIIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGDNG
ATDIDDGPNGQIEYVIQYNPDDPTSNDTFEIPLMLTGNIVLRKRLNYEDKTRYFVIIQAN
DRAQNLNERRTTTTTLTVDVLDGDDLGPMFLPCVLVPNTRDCRPLTYQAAIPELRTPEEL
NPIIVTPPIQAIDQDRNIQPPSDRPGILYSILVGTPEDYPRFFHMHPRTAELSLLEPVNR
DFHQKFDLVIKAEQDNGHPLPAFAGLHIEILDENNQSPYFTMPSYQGYILESAPVGATIS
DSLNLTSPLRIVALDKDIEDVPPSGVPTKDPELHLFLNDYTSVFTVTQTGITRYLTLLQP
VDREEQQTYTFSITAFDGVQESEPVIVNIQVMDANDNTPTFPEISYDVYVYTDMRPGDSV
IQLTAVDADEGSNGEITYEILVGAQGDFIINKTTGLITIAPGVEMIVGRTYALTVQAADN
APPAERRNSICTVYIEVLPPNNQSPPRFPQLMYSLEISEAMRVGAVLLNLQATDREGDSI
TYAIENGDPQRVFNLSETTGILTLGKALDRESTDRYILIITASDGRPDGTSTATVNIVVT
DVNDNAPVFDPYLPRNLSVVEEEANAFVGQVKATDPDAGINGQVHYSLGNFNNLFRITSN
GSIYTAVKLNREVRDYYELVVVATDGAVHPRHSTLTLAIKVLDIDDNSPVFTNSTYTVLV
EENLPAGTTILQIEAKDVDLGANVSYRIRSPEVKHFFALHPFTGELSLLRSLDYEAFPDQ
EASITFLVEAFDIYGTMPPGIATVTVIVKDMNDYPPVFSKRIYKGMVAPDAVKGTPITTV
YAEDADPPGLPASRVRYRVDDVQFPYPASIFEVEEDSGRVITRVNLNEEPTTIFKLVVVA
FDDGEPVMSSSATVKILVLHPGEIPRFTQEEYRPPPVSELATKGTMVGVISAAAINQSIV
YSIVSGNEEDTFGINNITGVIYVNGPLDYETRTSYVLRVQADSLEVVLANLRVPSKSNTA
KVYIEIQDENNHPPVFQKKFYIGGVSEDARMFTSVLRVKATDKDTGNYSVMAYRLIIPPI
KEGKEGFVVETYTGLIKTAMLFHNMRRSYFKFQVIATDDYGKGLSGKADVLVSVVNQLDM
QVIVSNVPPTLVEKKIEDLTEILDRYVQEQIPGAKVVVESIGARRHGDAFSLEDYTKCDL
TVYAIDPQTNRAIDRNELFKFLDGKLLDINKDFQPYYGEGGRILEIRTPEAVTSIKKRGE
SLGYTEGALLALAFIIILCCIPAILVVLVSYRQFKVRQAECTKTARIQAALPAAKPAVPA
PAPVAAPPPPPPPPPGAHLYEELGDSSMHKYEMPQYGSRRRLLPPAGQEEYGEVVGEAEE
EYEEEEEEPKKIKKPKVEIREPSEEEEVVVTIEKPPAAEPTYTTWKRARIFPMIFKKVRG
LADKRGIVDLEGEEWQRRLEEEDKDYLKLTLDQEEATESTVESEEESSSDYTEYSEEESE
FSESETTEEESESETPSEEEESSTPESEESESTESEGEKARKNIVLARRRPMVEEVKEVK
GRKEEPQEEQKEPKMEEEEHSEEEESGPAPVEESTDPEAQDIPEEGSAESASVEGGVESE
EESESGSSSSSSESQSGGPWGYQVPAYDRSKNANQKKSPGANSEGYNTAL
Download sequence
Identical sequences A0A087WZN9
gi|218505787|ref|NP_001136241.1| NP_001136241.1.87134 NP_001136241.1.92137 ENSP00000482794

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