SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for NP_001138785.1.87134 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  NP_001138785.1.87134
Domain Number 1 Region: 349-503
Classification Level Classification E-value
Superfamily Concanavalin A-like lectins/glucanases 1.54e-34
Family SPRY domain 0.0013
Further Details:      
 
Domain Number 2 Region: 187-298
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000000000000177
Family Fibronectin type III 0.0018
Further Details:      
 
Weak hits

Sequence:  NP_001138785.1.87134
Domain Number - Region: 40-147
Classification Level Classification E-value
Superfamily Formin homology 2 domain (FH2 domain) 0.000196
Family Formin homology 2 domain (FH2 domain) 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001138785.1.87134
Sequence length 530
Comment FSD1-like protein isoform 3 [Homo sapiens]; AA=GCF_000306695.2; RF=na; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Major
Sequence
MDSQKYCFKENENVTVDKACFLISNITIGPESINLQQEALQRIISTLANKNDEIQNFIDT
LHHTLKGVQENSSNILSELDEEFDSLYSILDEVKESMINCIKQEQARKSQELQSQISQCN
NALENSEELLEFATRSLDIKEPEEFSKAARQIKDRVTMASAFRLSLKPKVSDNMTHLMVD
FSQERQMLQTLKFLPVPKAPEIDPVECLVADNSVTVAWRMPEEDNKIDHFILEHRKTNFD
GLPRVKDERCWEIIDNIKGTEYTLSGLKFDSKYMNFRVRACNKAVAGEYSDPVTLETKAL
NFNLDNSSSHLNLKVEDTCVEWDPTGGKGQESKIKGKENKGRSGTPSPKRTSVGSRPPAV
RGSRDRFTGESYTVLGDTAIESGQHYWEVKAQKDCKSYSVGVAYKTLGKFDQLGKTNTSW
CIHVNNWLQNTFAAKHNNKVKALDVTVPEKIGVFCDFDGGQLSFYDANSKQLLYSFKTKF
TQPVLPGFMVWCGGLSLSTGMQVPSAVRTLQKSENGMTGSASSLNNVVTQ
Download sequence
Identical sequences A0A2I2YW30 Q9BXM9
ENSP00000417492 9606.ENSP00000417492 NP_001138785.1.87134 NP_001138785.1.92137 XP_018889805.1.27298 gi|223718222|ref|NP_001138785.1| ENSP00000417492 ENSP00000363848

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]