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Domain assignment for NP_001171110.1.92137 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001171110.1.92137
Domain Number 1 Region: 181-304
Classification Level Classification E-value
Superfamily Dystroglycan, domain 2 8.63e-60
Family Dystroglycan, domain 2 0.000000322
Further Details:      
 
Domain Number 2 Region: 62-160
Classification Level Classification E-value
Superfamily Cadherin-like 2.2e-19
Family Dystroglycan, N-terminal domain 0.00000289
Further Details:      
 
Domain Number 3 Region: 497-597
Classification Level Classification E-value
Superfamily Cadherin-like 1.29e-18
Family Dystroglycan, N-terminal domain 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_001171110.1.92137
Sequence length 895
Comment dystroglycan preproprotein [Homo sapiens]; AA=GCF_000001405.37; RF=reference genome; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Patch
Sequence
MRMSVGLSLLLPLWGRTFLLLLSVVMAQSHWPSEPSEAVRDWENQLEASMHSVLSDLHEA
VPTVVGIPDGTAVVGRSFRVTIPTDLIASSGDIIKVSAAGKEALPSWLHWDSQSHTLEGL
PLDTDKGVHYISVSATRLGANGSHIPQTSSVFSIEVYPEDHSELQSVRTASPDPGEVVSS
ACAADEPVTVLTVILDADLTKMTPKQRIDLLHRMRSFSEVELHNMKLVPVVNNRLFDMSA
FMAGPGNAKKVVENGALLSWKLGCSLNQNSVPDIHGVEAPAREGAMSAQLGYPVVGWHIA
NKKPPLPKRVRRQIHATPTPVTAIGPPTTAIQEPPSRIVPTPTSPAIAPPTETMAPPVRD
PVPGKPTVTIRTRGAIIQTPTLGPIQPTRVSEAGTTVPGQIRPTMTIPGYVEPTAVATPP
TTTTKKPRVSTPKPATPSTDSTTTTTRRPTKKPRTPRPVPRVTTKVSITRLETASPPTRI
RTTTSGVPRGGEPNQRPELKNHIDRVDAWVGTYFEVKIPSDTFYDHEDTTTDKLKLTLKL
REQQLVGEKSWVQFNSNSQLMYGLPDSSHVGKHEYFMHATDKGGLSAVDAFEIHVHRRPQ
GDRAPARFKAKFVGDPALVLNDIHKKIALVKKLAFAFGDRNCSTITLQNITRGSIVVEWT
NNTLPLEPCPKEQIAGLSRRIAEDDGKPRPAFSNALEPDFKATSITVTGSGSCRHLQFIP
VVPPRRVPSEAPPTEVPDRDPEKSSEDDVYLHTVIPAVVVAAILLIAGIIAMICYRKKRK
GKLTLEDQATFIKKGVPIIFADELDDSKPPPSSSMPLILQEEKAPLPPPEYPNQSVPETT
PLNQDTMGEYTPLRDEDPNAPPYQPPPPFTAPMEGKGSRPKNMTPYRSPPPYVPP
Download sequence
Identical sequences A0A024R2W4
NP_001159400.2.87134 NP_001159400.2.92137 NP_001171105.1.87134 NP_001171105.1.92137 NP_001171106.1.87134 NP_001171106.1.92137 NP_001171107.1.87134 NP_001171107.1.92137 NP_001171108.1.87134 NP_001171108.1.92137 NP_001171109.1.87134 NP_001171109.1.92137 NP_001171110.1.87134 NP_001171110.1.92137 NP_001171111.1.87134 NP_001171111.1.92137 NP_001171112.1.87134 NP_001171112.1.92137 NP_001171113.1.87134 NP_001171113.1.92137 NP_001171114.1.87134 NP_001171114.1.92137 NP_001171115.1.87134 NP_001171115.1.92137 NP_004384.4.87134 NP_004384.4.92137 gi|294997282|ref|NP_004384.4| gi|294997284|ref|NP_001159400.2| gi|294997288|ref|NP_001171105.1| gi|294997290|ref|NP_001171106.1| gi|294997292|ref|NP_001171107.1| gi|294997294|ref|NP_001171108.1| gi|294997296|ref|NP_001171109.1| gi|294997298|ref|NP_001171110.1| gi|294997300|ref|NP_001171111.1| gi|294997302|ref|NP_001171113.1| gi|294997304|ref|NP_001171112.1| gi|294997306|ref|NP_001171114.1| gi|294997308|ref|NP_001171115.1|

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