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Domain assignment for NP_001178433.1.76553 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001178433.1.76553
Domain Number 1 Region: 39-509
Classification Level Classification E-value
Superfamily Sema domain 3.53e-130
Family Sema domain 0.0000222
Further Details:      
 
Domain Number 2 Region: 1354-1481,1677-1866
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 9.94e-52
Family p120GAP domain-like 0.024
Further Details:      
 
Domain Number 3 Region: 954-1041
Classification Level Classification E-value
Superfamily E set domains 2.42e-16
Family NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 0.071
Further Details:      
 
Domain Number 4 Region: 860-954
Classification Level Classification E-value
Superfamily E set domains 0.00000000000000331
Family Other IPT/TIG domains 0.006
Further Details:      
 
Domain Number 5 Region: 1039-1143
Classification Level Classification E-value
Superfamily E set domains 0.0000000000000433
Family NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain 0.055
Further Details:      
 
Domain Number 6 Region: 512-564
Classification Level Classification E-value
Superfamily Plexin repeat 0.000000000000124
Family Plexin repeat 0.0012
Further Details:      
 
Domain Number 7 Region: 1140-1229
Classification Level Classification E-value
Superfamily E set domains 0.000000336
Family Other IPT/TIG domains 0.08
Further Details:      
 
Domain Number 8 Region: 811-843
Classification Level Classification E-value
Superfamily Plexin repeat 0.0000615
Family Plexin repeat 0.0027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001178433.1.76553
Sequence length 1896
Comment plexin-A4 precursor [Bos taurus]; AA=GCF_000003055.6; RF=representative genome; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Minor
Sequence
MKAMPWNWTCLLSHLLMVGMGSSTLLPRQSPPPSQKRSFVTFRGEPAESFNHLVVDERTG
HIYVGAVNRIYKLSSDLKVLVTHQTGPDEDNPKCYPPRIVQTCNEPLTPTNNVNKMLLID
YKENRLIACGSLYQGICKLLRLEDLFKLGEPFHKKEHYLSGVNESGSVFGVIVSYNNLDD
KLFIATAVDGKPEYFPTISSRKLTKNSEADGMFAYVFHDEFVASMIKIPSDTFTVIPDFD
IYYVYGFSSGNFVYFLTLQPEMVSPPGSTTKEQVYTSKLVRLCKEDTAFNSYVEVPIGCE
RSGVEYRLLQAAYLSKAGAVLARTLGVRPEDDLLFTVFSKGQKRKMKSLDESALCIFILK
QINDRIKERLQSCYRGEGTLDLAWLKVKDIPCSSALLTIDDNFCGLDMNAPLGVSEMVRG
IPVFTEDRDRMTSVIAYVYKNHSLAFVGTKSGKLKKLLVDLPNPGIEPALQYETVQVVEP
GPVLRDMAFSKDREQLYIMSERQLTRVPVESCGQYQSCSECLGSGDPHCGWCVLHNTCTR
KERCERSREPRRFASEVKQCVRLTVHPSNISVSQYNVLLVLETYNVPELTAGVNCTFEDL
SEMDGLVIGNQIQCYSPAAKEVPRIITENGDHHVVQLQLKSKETGMTFASTSFVFYNCSV
HNSCLSCVESPYRCHWCKYRHVCTHDPRSCSFQEGRVKLPEDCPQLLRVDKILVPVEVIK
PITLKAKNLPQPQSGQRGYECVLNIQGSEQRVPALRFNSSSVQCQNTSYSYEGMEINNLP
VELTVVWNGHFNIDNPAQNKVHLYKCGAMRESCGLCLKADPDFECGWCQSQGQCTLRQHC
PVHESQWLELSSTNSKCTNPRITEIIPVTGPREGGTKVTIRGENLGLEFRDIASHVKVAG
VECSPLVDGYIPAEQIVCEMGEAKPSQHAGFVEICVAVCRPEFMARSSQLYYFMTLTLSD
LKPSRGPRSGGTQVTITGTNLNAGSNVVVMFGKQPCLFHRRSPSYIVCNTTSSDEVLEMK
VTVQVDRAKIHQDLFFQYVEDPTIVRIEPEWSIVSGNTPIAVWGTHLDLIQNPQIRAKHG
GKEHINLCEVLNATEMTCQAPALALGPDHQSDLTERPEEFGFILDNVQSLLILNMTNFTY
YPNPVFEAFSPSGILELKPGTPIILKGKNLIPPVAGGNVKLNYTVLVGEKPCTVTVSDVQ
LLCESPNLIGRHKVMARVGGMEYSPGMVYIAPDSPLSLPAIVSIAVAGGLLIIFIVAVLI
AYKRKSRESDLTLKRLQMQMDNLESRVALECKEAFAELQTDIHELTSDLDGAGIPFLDYR
TYTMRVLFPGIEDHPVLRDLEVPGYRQERVEKGLKLFAQLINNKVFLLSFIRTLESQRSF
SMRDRGNVASLIMTVLQSKLEYATDVLKQLLADLIDKNLESKNHPKLLLRRTESVAEKML
TNWFTFLLYKFLKECAGEPLFSLFCAIKQQMEKGPIDAITGEARYSLSEDKLIRQQIDYK
TLVLSCVNPDNANSPEVPVKILNCDTITQVKEKILDAIFKNVPCSHRPKAADMDLEWRQG
SGARMILQDEDITTKIENDWKRLNTLAHYQVPDGSVVALVSKQVTAYNAVNNSTVSRTSA
SKYENMIRYTGSPDSLRSRTPMITPDLESGVKMWHLVKNHEHGDQKEGDRGSKMVSEIYL
TRLLATKGTLQKFVDDLFETIFSTAHRGSALPLAIKYMFDFLDEQADKHGIHDPHVRHTW
KSNCLPLRFWVNMIKNPQFVFDIHKNSITDACLSVVAQTFMDSCSTSEHRLGKDSPSNKL
LYAKDIPSYKNWVERYYSDIGKMPAISDQDMNAYLAEQSRMHMNEFNTMSALSEIFSYVG
KYSEEILGPLDHDDQCGKQKLAYKLEQVITLMSLDS
Download sequence
Identical sequences NP_001178433.1.59421 NP_001178433.1.76553

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