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Domain assignment for NP_001185234.1.80155 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001185234.1.80155
Domain Number 1 Region: 330-389
Classification Level Classification E-value
Superfamily RING/U-box 0.0000000000471
Family RING finger domain, C3HC4 0.02
Further Details:      
 
Weak hits

Sequence:  NP_001185234.1.80155
Domain Number - Region: 206-320
Classification Level Classification E-value
Superfamily Outer surface protein C (OspC) 0.0247
Family Outer surface protein C (OspC) 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001185234.1.80155
Sequence length 397
Comment histone mono-ubiquitination 2 [Arabidopsis thaliana]; AA=GCF_000001735.3; RF=reference genome; TAX=3702; STAX=3702; NAME=Arabidopsis thaliana; ecotype=Columbia; AL=Chromosome; RT=Major
Sequence
MLTKADEQKGLEDKCAKQMAEIKSLKALIEKLLKEKLQLQNLASICTRECNDDRGLAEIK
DSQRKAQAQAEELKNVLDEHFLELRVKAAHETESACQERLATAKAEIAELRTQLDLSERE
VLELKEGIKVKEQEAEASIAEMETIGQAYEDMQTQNQHLLQQVAERDDYNIKLVSESVKT
KHAYNTHLSEKQVMEKQLHQVNASVENFKARIAHNEEQMKGCFSEAYKLIQEDRHLVISL
ETTKWEVADADKEFRWLKSAVSSSEKEYEQISRRTDDIKLELDDERREKKKLEEELMELN
KELEELGSESVEAAIVRLQEEVKNCKNILKCGVCFDRPKERISTTAFCFKHYLQVVIVKC
YHLFCQQCIQRSLEIRHRKCPGCGTAFGQNDVRLVKM
Download sequence
Identical sequences F4I080
AT1G55250.4 NP_001185234.1.80155

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