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Domain assignment for NP_001186242.1.86415 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001186242.1.86415
Domain Number 1 Region: 841-889
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000307
Family Laminin-type module 0.0098
Further Details:      
 
Domain Number 2 Region: 354-406
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000053
Family Laminin-type module 0.028
Further Details:      
 
Domain Number 3 Region: 994-1041
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000586
Family Laminin-type module 0.002
Further Details:      
 
Domain Number 4 Region: 1104-1152
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000698
Family Laminin-type module 0.015
Further Details:      
 
Domain Number 5 Region: 887-937
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000126
Family Laminin-type module 0.005
Further Details:      
 
Domain Number 6 Region: 528-570
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000257
Family Laminin-type module 0.014
Further Details:      
 
Domain Number 7 Region: 287-351
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000115
Family Laminin-type module 0.027
Further Details:      
 
Domain Number 8 Region: 793-843
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000184
Family Laminin-type module 0.0061
Further Details:      
 
Domain Number 9 Region: 1046-1101
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000642
Family Laminin-type module 0.0038
Further Details:      
 
Domain Number 10 Region: 477-520
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000725
Family Laminin-type module 0.015
Further Details:      
 
Domain Number 11 Region: 947-996
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000001
Family Laminin-type module 0.079
Further Details:      
 
Domain Number 12 Region: 435-479
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000067
Family Laminin-type module 0.045
Further Details:      
 
Domain Number 13 Region: 1152-1199
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000279
Family Laminin-type module 0.01
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001186242.1.86415
Sequence length 1773
Comment laminin subunit beta-4 [Gallus gallus]; AA=GCF_000002315.4; RF=representative genome; TAX=9031; STAX=9031; NAME=Gallus gallus; breed=Red Jungle fowl, inbred line UCD001; AL=Chromosome; RT=Major
Sequence
MEIRGWECLEGADGEQRRSERCAGKGGETEREGLLVGLQQAQDDCGAGSCHPAVGDLLLG
RSKQLVASSTCGVNGPQKYCIIGYLEAEQKCFVCDSRYPYNPYTQHNSHMIENVITAFEP
DRKKKWWQSENGVDHVSIRLDLETLFQFSHLILTFKTFRPAAMLVERSTDFGQTWKAFRY
FAQDCAASFPNISSGPSKGVGDVICDSRYSDTEPSTEGEVVLKALDPSFEIENPYVPYIQ
ELITMTNLRINFTKLHTLGDALLGRRHGDPLEKYYYAVYEMVVRGNCFCNGHASHCDPIQ
NLRGDVFHQPGMVHGRCICHHNTEGLSCERCKDFYNDAPWRPAEGTQNNACKRCNCNGHS
GRCHFDMAVYQASGGVSGGVCEDCQHNTTGHHCDQCKLFFYQDPHKAISDPHACLPCSCN
PEGTLHHGACESHTDPVLGTVAGRCLCKENVEGVHCDKCKANHFGLRGSDPLGCQPCNCD
AAGTLPFSVCDSTTGECLCQQFTTGRRCEKCVEGYWGLGKSVYGCSPCDCDIGGSQDNLC
SPEDGQCKCLPNIVGRQCNEPAPGYFFLPLDYYIYEAEHATPLSGSAPLGAAERGQDLAL
EVVFRQPSTGRAVTWTGPGFIRVPSGAGLRFAIDNIPLAMDFTIAIRYEPETLEDWLASV
AVQPTGVSSSQHCKANSFSQEPHVFALPATKRIALLQTPVCLEPGTQYSVDAYFSQPSAS
VPKAKPFILIDSLGLIPRINSMENLCNKKDLDDYQKYHCVEIASEVGPHVLPEACARLIA
SMSARLHHGAVACKCNPQGSLNASCSRLGGQCHCKANVVGRCCDTCSAGSYGFGFHGCYP
CECHPQGSVSSLCDQVTGQCACLRDVDGRRCSQCLPGYFGFPHCRPCACHGFAELCHPVT
GECLNCSRFTAGSHCERCIDGYYGNPSNREPCRPCMCPGVPTSKRFFAHSCYQDSQTSQI
VCNCLEGYSGNRCDECPSGFYKIPGSPGEECAPCPCNNNIDVTDPESCNRVTGECVKCLH
NTHGANCQFCKPGYFGSALNQDCRICKCNPAGVLPATCPGGDATCLCDPATGACLCQPNV
VGTTCDQCAPGYWDLAGGKGCQLCDCDLKNTQSNQCDQLTGQCQCKVGYGGKRCDECEEN
YFGNPQKHCISCNCNPEGTNWPQCDKATGVCNCRAGVTGRFCDQCGRGFEKDFPSCRQCH
LCFDEWDTEITALAQTVQGLMRFAASLEDKGGRMPSCDMRFKAFEDAISEIERILKRPVF
SWEALSSIKDFHGYVQQQITQMSPIRSMPYEFPDLTASIEDIGEEADRVYELLQQKLDLH
RTIHYLSLKEAINNIRKHSEVSFLAEEKARETTPVVWHSQHTRQSVLTVIHKQAWEGSKV
LEQLKLIKIPGIQHLAEKICGVPGNHSCAAAACGGGPNCSGALPLSSSAFRKAEETAVLL
TNLTTQLQDPENQVEHIRRMAEDTKLKGSHFNGELERAKNQIKIDREVTKEFIKKVKNFL
SDESVPPEDIEQVASYVLQINLPLTPRELRSMIGKIRSIMAHCERYKLNANKRNGKMEVA
QTLLVEARAADKAAKALPPVDKINDELKNAVSSQGRSKNTLMKLNEGIQGIRAQITQAGN
QMNKTSDELNDFSAKQSRLEDEITTLQTKVLMNRNQATNVRAGAEAAYKQAQKIDNEFAD
IKRKYAILQDKLKAKGPPKVTLQKVKQLKEEAEKLAEETEKKIRRITDLEKKLQDLNQTK
QDKAEQLRQLEEQVIAIKNEITEQESKYSTCKS
Download sequence
Identical sequences F1NUQ6
NP_001186242.1.86415

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