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Domain assignment for NP_001191100.1.87134 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001191100.1.87134
Domain Number 1 Region: 18-114
Classification Level Classification E-value
Superfamily SWIB/MDM2 domain 1.96e-45
Family SWIB/MDM2 domain 0.000081
Further Details:      
 
Domain Number 2 Region: 241-285
Classification Level Classification E-value
Superfamily Ran binding protein zinc finger-like 2.83e-17
Family Ran binding protein zinc finger-like 0.00012
Further Details:      
 
Weak hits

Sequence:  NP_001191100.1.87134
Domain Number - Region: 386-432
Classification Level Classification E-value
Superfamily RING/U-box 0.000777
Family RING finger domain, C3HC4 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001191100.1.87134
Sequence length 440
Comment protein Mdm4 isoform 2 [Homo sapiens]; AA=GCF_000306695.2; RF=na; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Major
Sequence
MTSFSTSAQCSTSDSACRISPGQINQVRPKLPLLKILHAAGAQGEMFTVKEVMHYLGQYI
MVKQLYDQQEQHMVYCGGDLLGELLGRQSFSVKDPSPLYDMLRKNLVTLATATTDAAQTL
ALAQDHSMDIPSQDQLKQSAEESSTSRKRTTEDDIPTLPTSEHKCIHSREDEDLIENLAQ
DETSRLDLGFEEWDVAGLPWWFLGNLRSNYTPRSNGSTDLQTNQVIEVGKNDDLEDSKSL
SDDTDVEVTSEDEWQCTECKKFNSPSKRYCFRCWALRKDWYSDCSKLTHSLSTSDITAIP
EKENEGNDVPDCRRTISAPVVRPKDAYIKKENSKLFDPCNSVEFLDLAHSSESQETISSM
GEQLDNLSEQRTDTENMEDCQNLLKPCSLCEKRPRDGNIIHGRTGHLVTCFHCARRLKKA
GASCPICKKEIQLVIKVFIA
Download sequence
Identical sequences ENSP00000396840 gi|323510634|ref|NP_001191100.1| ENSP00000396840 NP_001191100.1.87134 NP_001191100.1.92137

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