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Domain assignment for NP_001256424.1.50509 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001256424.1.50509
Domain Number 1 Region: 3-184
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 3.55e-70
Family Calponin-homology domain, CH-domain 0.0000146
Further Details:      
 
Domain Number 2 Region: 200-323
Classification Level Classification E-value
Superfamily Spectrin repeat 5.5e-32
Family Spectrin repeat 0.00000492
Further Details:      
 
Domain Number 3 Region: 438-559
Classification Level Classification E-value
Superfamily Spectrin repeat 6.54e-24
Family Spectrin repeat 0.0000247
Further Details:      
 
Domain Number 4 Region: 324-433
Classification Level Classification E-value
Superfamily Spectrin repeat 3.53e-23
Family Spectrin repeat 0.000011
Further Details:      
 
Domain Number 5 Region: 562-674
Classification Level Classification E-value
Superfamily Spectrin repeat 3.31e-17
Family Spectrin repeat 0.0000355
Further Details:      
 
Domain Number 6 Region: 666-786
Classification Level Classification E-value
Superfamily EF-hand 0.0000000000000346
Family EF-hand modules in multidomain proteins 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001256424.1.50509
Sequence length 823
Comment AcTiniN [Caenorhabditis elegans]; AA=GCF_000002985.6; RF=reference genome; TAX=6239; STAX=6239; NAME=Caenorhabditis elegans; strain=Bristol N2; AL=Complete Genome; RT=Major
Sequence
MLLLEVISGEPLPKPDRGKMRFHKIANVNKALEYIESKGVKLVSIGAEEIVDGNVKMTLG
LIWTIILRFAIQDINVEELSARDGLLLWCQRKTAPYNNVNVQNFHNSWKDGLAFCALIHR
HRPDLLDYSQLHKGDPIHNLNLAFDIAEKHLDIPKMLDAEDMANSQPDEKAVMTYVSCYY
HYFSGMRKAETAANRICRVLKVNQENEKMMEDYENLASDLLAWINRWMPWLANRSTDDTL
QQAQQKLEDYRNYRRREKPPRIEDKGRLETLFNTLQTRLRLSNRPAFLPRDGHLIKDINA
AWAGLEDSEKGFEEWLLSEIMRLERLEHLAEKFRRKCALHEEWAHGKEDALRSNDWRSCG
LYKIKALRKRHEAFESDLGAHQDRVEQIAAIARELNNLRYPDIGPINARCQAICSQWDRL
GQLSSKRRETLEDAERIAERLDSLYLDFAKRAAPFNNWLDGAREDLADLVIVHEMREIEE
LVNAHDQFKSTLGDADREFSSINQIEHEVEHLVTSHGLDRELLRNPYTDLSASDIRRKWG
EVQNSVPRRDSQLQAELKRQQNNERLRTIFAEKANQVGPWLERELEQVLAIGLGGRGRLE
DAIQQLRSIQRNVLGYKPNLDELERVHQEMQENFVFENRKSRYSMESLRVGWETLLTSIN
KTINEFENQVLLRDSKGISEEQIAEFRASFSHFDKERAGLDPEQLRSCLISVGYTIRPGR
EGDAELHRVLAHVDPNRMGRVPFEAFLDFMTKENSDQDTVEQMIDSFRILASGKTFITAD
ELERELPRDQAAYCMARMAPSREPGAPPRSFDYVTFSRSLYSQ
Download sequence
Identical sequences H2L2C8
W04D2.1d NP_001256424.1.50509

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