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Domain assignment for NP_001301113.1.57651 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001301113.1.57651
Domain Number 1 Region: 31-468
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 8.37e-108
Family Integrin alpha N-terminal domain 0.0000000000000743
Further Details:      
 
Domain Number 2 Region: 769-997
Classification Level Classification E-value
Superfamily Integrin domains 6.02e-70
Family Integrin domains 0.00000000282
Further Details:      
 
Domain Number 3 Region: 469-628
Classification Level Classification E-value
Superfamily Integrin domains 1.73e-47
Family Integrin domains 0.0000000585
Further Details:      
 
Domain Number 4 Region: 629-763
Classification Level Classification E-value
Superfamily Integrin domains 7.85e-37
Family Integrin domains 0.000000204
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) NP_001301113.1.57651
Sequence length 1048
Comment integrin alpha-V precursor [Capra hircus]; AA=GCF_001704415.1; RF=representative genome; TAX=9925; STAX=9925; NAME=Capra hircus; breed=San Clemente; AL=Chromosome; RT=Major
Sequence
MAFPPRRRLRLRPRRLPLLLPGILLPLCGAFNLDVESPAEYSGPEGSYFGFAVDFFVPSA
SSRMFLLVGAPKANTTQPGIVEGGQVLKCDWSSHRRCQPIEFDATGNRDYAKDDPLEFKS
HQWFEASVRSKQDKILACAPLYHWRTEMKQEREPVGTCFLQDGTKTVEYAPCRSKNIDAD
GQGFCQGGSSIDFTKADRVLLGGPGSFYWQGQLISDRVAEIVSKYDPKVYSIKYNNQLAT
RIAQAIFDDSYLGYSVAVGDFNGDGIDDFVSGVPRAARTLGMVYIYDGKNMSSLHNFTGE
QMAAYFGFSVAATDINGDDYADVFIGAPLFMDRGSDGKLQEVGQVSVALQKASGDFQTIK
LNGFEVFARFGSAIAPLGDLDQDGFNDIAIAAPYGGEDKKGIVYIFNGRPTGLNAVPSQI
LEGKWAARSMPPSFGYSMKGATDIDKNGYPDLIVGAFGVDRAVLYRARPVITVNAGLEVY
PSILNQENKTCPLPGTDLKVSCFNVRFCLKADGKGALPTKLDFQVELLLDKLKQKGAIRR
ALFLHNRSPGHSKNMTISRGGQMQCEELIAYLRDESEFRDKLTPITIFMEYWLDYRTAAD
ATGLQPILNQFTPANVSRQAHILLDCGEDNVCKPKLEVSVDSDQKKIYIGDDNPLTLIVK
AQNQGEGAYEAELIVSIPLQADFIGVVRNSEALARLSCAFKTENQTRQVVCDLGNPMKAG
TQLSAGLRFSVHQQSEMDTSVKFDLQIQSSNLFDKVSPVVSYKVDLAVLAAVEIRGVSSP
DYIFLPIPNWKYKENPETEEDVGPVVQHIYELRNNGPSSFSKAMLHLQWPYKYNNNTLLY
ILQYDIDGPMNCTSDMEINPLRIKISNSQTSEKNDTIGGQGDRNHLITKRDLTLSEGDVH
TLGCGIAECLKIVCQVGRLDRGKSAILYVRSLLWTETFMNKENQNHSYSLKSSASFNVIE
FPYKNLPIEDIFNSTLVTTNVTWGIQPAPMPVPVWVIILAVLAGLLLLAVLVFVMYRMGF
FKRVRPPQEEQEREQLQPHENGEGNSET
Download sequence
Identical sequences J7H550
NP_001301113.1.57651

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