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Domain assignment for NP_001310941.1.92137 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_001310941.1.92137
Domain Number 1 Region: 57-180
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 2.62e-59
Family alpha-catenin/vinculin 0.00000053
Further Details:      
 
Domain Number 2 Region: 222-411
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 1.73e-56
Family alpha-catenin/vinculin 0.00027
Further Details:      
 
Domain Number 3 Region: 2-55
Classification Level Classification E-value
Superfamily alpha-catenin/vinculin-like 8.16e-20
Family alpha-catenin/vinculin 0.0001
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_001310941.1.92137
Sequence length 455
Comment catenin alpha-1 isoform 12 [Homo sapiens]; AA=GCF_000001405.37; RF=reference genome; TAX=9606; STAX=9606; NAME=Homo sapiens; AL=Chromosome; RT=Patch
Sequence
MSASQLEALCPQVINAALALAAKPQSKLAQENMDLFKEQWEKQVRVLTDAVDDITSIDDF
LAVSENHILEDVNKCVIALQEKDVDGLDRTAGAIRGRAARVIHVVTSEMDNYEPGVYTEK
VLEATKLLSNTVMPRFTEQVEAAVEALSSDPAQPMDENEFIDASRLVYDGIRDIRKAVLM
IRTPEELDDSDFETEDFDVRSRTSVQTEDDQLIAGQSARAIMAQLPQEQKAKIAEQVASF
QEEKSKLDAEVSKWDDSGNDIIVLAKQMCMIMMEMTDFTRGKGPLKNTSDVISAAKKIAE
AGSRMDKLGRTIADHCPDSACKQDLLAYLQRIALYCHQLNICSKVKAEVQNLGGELVVSG
VDSAMSLIQAAKNLMNAVVQTVKASYVASTKYQKSQGMASLNLPAVSWKMKAPEKKPLVK
REKQDETQTKIKRASQKKHVNPVQALSEFKAMDSI
Download sequence
Identical sequences NP_001310941.1.87134 NP_001310941.1.92137 NP_001310942.1.87134 NP_001310942.1.92137 XP_012604265.1.48125 XP_019820627.1.53367

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