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Domain assignment for NP_033448.2.92730 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_033448.2.92730
Domain Number 1 Region: 350-499
Classification Level Classification E-value
Superfamily TRAF domain-like 2.45e-52
Family MATH domain 0.0000000726
Further Details:      
 
Domain Number 2 Region: 311-349
Classification Level Classification E-value
Superfamily Trimerization domain of TRAF 0.00000000000102
Family Trimerization domain of TRAF 0.00037
Further Details:      
 
Domain Number 3 Region: 28-74
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000033
Family RING finger domain, C3HC4 0.014
Further Details:      
 
Domain Number 4 Region: 103-178
Classification Level Classification E-value
Superfamily TRAF domain-like 0.0000451
Family SIAH, seven in absentia homolog 0.01
Further Details:      
 
Weak hits

Sequence:  NP_033448.2.92730
Domain Number - Region: 162-238
Classification Level Classification E-value
Superfamily TRAF domain-like 0.0608
Family SIAH, seven in absentia homolog 0.011
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_033448.2.92730
Sequence length 501
Comment TNF receptor-associated factor 2 isoform b [Mus musculus]; AA=GCF_000001635.25; RF=reference genome; TAX=10090; STAX=10090; NAME=Mus musculus; AL=Chromosome; RT=Patch
Sequence
MAAASVTSPGSLELLQPGFSKTLLGTRLEAKYLCSACKNILRRPFQAQCGHRYCSFCLTS
ILSSGPQNCAACVYEGLYEEGISILESSSAFPDNAARREVESLPAVCPNDGCTWKGTLKE
YESCHEGLCPFLLTECPACKGLVRLSEKEHHTEQECPKRSLSCQHCRAPCSHVDLEVHYE
VCPKFPLTCDGCGKKKIPRETFQDHVRACSKCRVLCRFHTVGCSEMVETENLQDHELQRL
REHLALLLSSFLEAQASPGTLNQVGPELLQRCQILEQKIATFENIVCVLNREVERVAVTA
EACSRQHRLDQDKIEALSNKVQQLERSIGLKDLAMADLEQKVSELEVSTYDGVFIWKISD
FTRKRQEAVAGRTPAIFSPAFYTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDA
LLQWPFNQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVSDMNIASGCPLFCPVSKMEA
KNSYVRDDAIFIKAIVDLTGL
Download sequence
Identical sequences P39429 Q3U8L1
NP_033448.2.92730 ENSMUSP00000028311

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