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Domain assignment for NP_180041.5.80155 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_180041.5.80155
Domain Number 1 Region: 639-737
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 9.22e-21
Family B3 DNA binding domain 0.0049
Further Details:      
 
Domain Number 2 Region: 814-909
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.14e-20
Family B3 DNA binding domain 0.0038
Further Details:      
 
Domain Number 3 Region: 489-574
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.45e-19
Family B3 DNA binding domain 0.0084
Further Details:      
 
Domain Number 4 Region: 154-253
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 3.53e-19
Family B3 DNA binding domain 0.015
Further Details:      
 
Domain Number 5 Region: 7-101
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 4.71e-18
Family B3 DNA binding domain 0.004
Further Details:      
 
Domain Number 6 Region: 298-395
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 9.22e-18
Family B3 DNA binding domain 0.0044
Further Details:      
 
Domain Number 7 Region: 938-1034
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 7.85e-17
Family B3 DNA binding domain 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) NP_180041.5.80155
Sequence length 1045
Comment B3 domain-containing protein REM13 [Arabidopsis thaliana]; AA=GCF_000001735.3; RF=reference genome; TAX=3702; STAX=3702; NAME=Arabidopsis thaliana; ecotype=Columbia; AL=Chromosome; RT=Major
Sequence
MANSRIYPQFFHTLVPSFHTHLMIPEDFFSEYIEGRSVAELKLDFSDKSWEVKLSDRRIT
DGWEEFVVANDFRIGDVVAFRYVGNLVFHVSNLGPNYYEIEHNDGESLLRKRLHQVDFSS
NNGDVCDSEELPKEKKAKTNSEEADAVSSSSSADKSCFMAIITALDLTTDTLYLPLHFTS
ANGLTRKNREIILTDGGERSRVLDLRFDESSGTFYISRGWRNFCDENGQKAGGFFLFKLV
GKGETLVLSFCPTESINGEENITREDSKDECSSLDSLMNIVEKKKYIPKPRGSPYSSYSP
SHKQFVTFTLPPDYARIGKLSLSAPFVRENGINKPGEICLLDKHGRKWLTSLLLDSKGTM
SLGKGWKEFVKANSLETGFTLKLIWEETTPVLSLCSPESNSDREQEEISKAIEKHSLFID
PSNRDKISNNDKEENMSWERKKDHLKSRDSTLSSQKQFVTITITPSSDRLVSLSNDSCLV
VVSLLYFDMRLPKVFTRENGINKPGRITLLGKDGIKQQTNLLFDKANGAMSLGHGWKDFV
KDNGLKTGDSFTLKLIWEDQTPVLSLCPADCSIDREAGGGRSETNQKKSLPIEPSTCKKI
RKDVNIKDDNSKEKNDKEESKSVDGERKYLRGTYLTPSSQKHFVTLTITPSSIKKDRLIL
SPQFARKNNIDKPGMIYLLDTDGTKWLISLQRDKKGTMSLGKGWKEFAEANDFKLGESFT
MELVWEDTTPMLSLLRTEFRSSKANEKESISSEHKTRESSPTIKNRIVTPALTPEDVKAC
KLILPSQFMKKIRTVDKERNHLKGRDLNPSCQKQFVTFTITPTCVGKNRLILSAQFAREN
NINQPGTIYLLDTDGRKWLTTVKRDKKGTMSLGKGWKEFADTKDLKSGDSFTMELIWEDT
NPVLSLLRTKFSSSKSNKEESIFLEPKSRDSSSPTIVNRFVTLALTPEDVTACKLILPSQ
FMKANGINNKLGKITLLGENGVEWPGYMLSLDGTLALGNGWEGFCEANGVKLGQTFTLEF
VNEQDTTTTPVLKFSSVETIYKNVN
Download sequence
Identical sequences P0CAP5
AT2G24650.1 AT2G24650.1 NP_180041.5.80155

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