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Domain assignment for NP_776610.2.76553 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  NP_776610.2.76553
Domain Number 1 Region: 385-436,465-665
Classification Level Classification E-value
Superfamily Clavaminate synthase-like 4.94e-37
Family PhyH-like 0.069
Further Details:      
 
Domain Number 2 Region: 60-181
Classification Level Classification E-value
Superfamily ARID-like 6.54e-32
Family ARID domain 0.00074
Further Details:      
 
Domain Number 3 Region: 312-379
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 3.99e-17
Family PHD domain 0.0013
Further Details:      
 
Domain Number 4 Region: 1180-1254
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.0000000000102
Family PHD domain 0.0077
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) NP_776610.2.76553
Sequence length 1555
Comment lysine-specific demethylase 5C [Bos taurus]; AA=GCF_000003055.6; RF=representative genome; TAX=9913; STAX=9913; NAME=Bos taurus; breed=Hereford; AL=Chromosome; RT=Minor
Sequence
MEPGSDDFLPPPECPVFEPSWAEFRDPLGYIAKIRPIAEKSGICKIRPPADWQPPFAVEV
DNFRFTPRIQRLNELEAQTRVKLNYLDQIAKFWEIQGSSLKIPNVERRILDLYSLSKIVV
EEGGYEAICKDRRWARVAQRLNYPPGKNIGSLLRSHYERIVYPYEMYQSGANLVQCNTRP
FDNEEKDKEYKPHSIPLRQSVQPSKFNSYGRRAKRLQPDPEPTEEDIEKNPELKKLQIYG
AGPKMMGLGLMAKDKTLRKKDKEGPECPPTVVVKEESGGDMKVESTSPKTFLESKEELSH
SPEPCTKMTMRLRRNHSNAQFIESYVCRMCSRGDEDDKLLLCDGCDDNYHIFCLLPPLPE
IPKGVWRCPKCVMAECKRPPEAFGFEQATREYTLQSFGEMADSFKADYFNMPVHMVPTEL
VEKEFWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSGWNLNVMP
VLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSL
AAEHLEEVMKKLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRA
YHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMAACPEKLDL
NLAAAVHKEMFIMVQEERRLRKALLEKGITEAEREAFELLPDDERQCIKCKTTCFLSALA
CYDCPDGLVCLSHINDLCKCSSSRQYLRYRYTLDELPAMLHKLKVRAESFDTWANKVRVA
LEVEDGRKRSLEELRALESEARERRFPNSELLQRLKNCLSEAEACVSRALGLVSGQEAGP
HRMAGLQMTLAELRAFLDQMNNLPCAMHQIGDVKGILEQVEAYQAEACEALASLPSSPGL
LQSLLERGQQLGVEVPEAQQLQRQVEQAQWLDEVKRTLAPSARRGTLAVMRGLLVAGASV
APSPAVDKAQAELQELLTIAERWEEKAHLCLEARQKHPPATLEAIIHEAENIPVHLPNIQ
ALKEALAKARAWIADVDEIQNGDHYPCLDDLEGLVAVGRDLPVGLEELRQLELQVLTAHS
WREKASKTFLKKNSCYTLLEVLCPCADAGSDSTKRSRWMEKELGLYKSDTELLGLSAQDL
RDPGSVIVAFKEGEQKEKEGILQLRRTNSTKPSPLASSTTASSATSICVCGQVPAGVGAL
QCDLCQDWFHGRCVSVPRLLSSPRPSPTPSPLLAWWEWDTKFLCPLCMRSRRPRLETILA
LLVALQRLPVRLPEGEALQCLTERAISWQGRARQALASEDVTALLGRLAELRQRLQAEPR
PEEPPTYPSAPASDPLREGSGKDMPKVQGLLENGDSMTSPEKVAPGEGSDLELLSSLLPR
LTGPVLELPEATRTPLEELMLEGDLLEVTLDENQSIWQLLQAGQPPDVERIRTLLELEKA
ERHGSRARGRALERRRRRKADRGGEGDDPAREELEPKRVRSSGPEAEEAQEEEELEEETG
GEGPPPPLPTTDSPSTQENGLEPALGASSGSSGPFPTLTPRLHVPCPQQPSQQQL
Download sequence
Identical sequences F1MYV2
ENSBTAP00000019893 NP_776610.2.59421 NP_776610.2.76553 ENSBTAP00000019893 9913.ENSBTAP00000019893

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