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Domain assignment for WP_000110242.1.89255 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_000110242.1.89255
Domain Number 1 Region: 178-395
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 6.43e-83
Family Type II restriction endonuclease catalytic domain 0.00000000188
Further Details:      
 
Domain Number 2 Region: 3-174
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 1.26e-61
Family Type II restriction endonuclease effector domain 0.0000000189
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_000110242.1.89255
Sequence length 402
Comment MULTISPECIES: type II restriction endonuclease [Enterobacterales]; AA=GCF_002247685.1; RF=na; TAX=624; STAX=624; NAME=Shigella sonnei; strain=ECSW+02; AL=Contig; RT=Major
Sequence
MSVFHNWLLEIACENYFVYIKRLSANDTGATGGHQVGLYIPSGIVEKLFPSINHTRELNP
SVFLTAHVSSHDCPDSEARAIYYNSRHFGKTRNEKRITRWGRGSPLQNPENTGALTLLAF
KLDEQGGDCKEVNIWVCASTDEEDVIETAIGEVIPGALISGPAGQILGGLSLQQAPVNHK
YILPEDWHLRFPSGSEIIQYAASHYVKNSLDPDEQLLDRRRVEYDIFLLVEELHVLDIIR
KGFGSVDEFIALANSVSNRRKSRAGKSLELHLEHLFIEHGLRHFSTQAITEGNKKPDFLF
PSAGAYHDTEFPVENLRMLAVKTTCKDRWRQILNEADKIHQVHLFTLQEGVSLAQYREMR
ESGVRLVVPSSLHKKYPEAVRAELMTLGAFIAELTELYADIP
Download sequence
Identical sequences A0A1Z3WZZ3 A0A235KPR8 A0A2D2Y2X0 A0A2J4QHN6 D7RVG4 H6D9B1 H9TJE0
gi|298206538|ref|YP_003717475.1|NC_014231 gi|410653886|ref|YP_006957174.1|NC_019122 gi|525811200|ref|YP_008248823.1|NC_021811 WP_000110242.1.100251 WP_000110242.1.100496 WP_000110242.1.101096 WP_000110242.1.101734 WP_000110242.1.11254 WP_000110242.1.11369 WP_000110242.1.11408 WP_000110242.1.11511 WP_000110242.1.11677 WP_000110242.1.11735 WP_000110242.1.13258 WP_000110242.1.15416 WP_000110242.1.163 WP_000110242.1.17701 WP_000110242.1.17747 WP_000110242.1.1798 WP_000110242.1.18064 WP_000110242.1.1818 WP_000110242.1.18682 WP_000110242.1.19084 WP_000110242.1.19100 WP_000110242.1.19273 WP_000110242.1.19642 WP_000110242.1.20503 WP_000110242.1.2063 WP_000110242.1.20785 WP_000110242.1.21537 WP_000110242.1.21548 WP_000110242.1.21616 WP_000110242.1.22623 WP_000110242.1.2362 WP_000110242.1.23959 WP_000110242.1.24808 WP_000110242.1.24946 WP_000110242.1.25150 WP_000110242.1.25379 WP_000110242.1.2568 WP_000110242.1.26083 WP_000110242.1.26130 WP_000110242.1.2654 WP_000110242.1.26980 WP_000110242.1.27423 WP_000110242.1.27774 WP_000110242.1.28032 WP_000110242.1.2814 WP_000110242.1.28156 WP_000110242.1.28509 WP_000110242.1.28953 WP_000110242.1.29042 WP_000110242.1.29274 WP_000110242.1.29509 WP_000110242.1.29827 WP_000110242.1.30472 WP_000110242.1.32232 WP_000110242.1.32434 WP_000110242.1.32515 WP_000110242.1.32838 WP_000110242.1.33136 WP_000110242.1.33325 WP_000110242.1.3378 WP_000110242.1.33888 WP_000110242.1.34081 WP_000110242.1.34711 WP_000110242.1.34782 WP_000110242.1.36071 WP_000110242.1.36204 WP_000110242.1.3640 WP_000110242.1.36453 WP_000110242.1.36454 WP_000110242.1.36699 WP_000110242.1.37750 WP_000110242.1.37964 WP_000110242.1.38843 WP_000110242.1.39105 WP_000110242.1.39471 WP_000110242.1.40013 WP_000110242.1.40533 WP_000110242.1.40617 WP_000110242.1.40622 WP_000110242.1.4126 WP_000110242.1.41436 WP_000110242.1.42661 WP_000110242.1.42676 WP_000110242.1.43371 WP_000110242.1.43637 WP_000110242.1.44296 WP_000110242.1.44386 WP_000110242.1.44608 WP_000110242.1.44917 WP_000110242.1.44933 WP_000110242.1.44971 WP_000110242.1.4535 WP_000110242.1.45582 WP_000110242.1.46221 WP_000110242.1.46882 WP_000110242.1.47008 WP_000110242.1.47257 WP_000110242.1.48203 WP_000110242.1.48216 WP_000110242.1.49204 WP_000110242.1.49733 WP_000110242.1.50353 WP_000110242.1.51255 WP_000110242.1.51425 WP_000110242.1.51539 WP_000110242.1.51831 WP_000110242.1.52161 WP_000110242.1.53155 WP_000110242.1.53262 WP_000110242.1.54169 WP_000110242.1.54749 WP_000110242.1.55325 WP_000110242.1.55359 WP_000110242.1.55489 WP_000110242.1.5560 WP_000110242.1.55868 WP_000110242.1.56371 WP_000110242.1.56528 WP_000110242.1.56934 WP_000110242.1.57558 WP_000110242.1.58622 WP_000110242.1.59490 WP_000110242.1.59533 WP_000110242.1.60373 WP_000110242.1.60561 WP_000110242.1.60774 WP_000110242.1.61779 WP_000110242.1.62818 WP_000110242.1.63045 WP_000110242.1.63243 WP_000110242.1.6334 WP_000110242.1.64121 WP_000110242.1.65061 WP_000110242.1.65370 WP_000110242.1.65572 WP_000110242.1.66395 WP_000110242.1.6640 WP_000110242.1.6678 WP_000110242.1.66962 WP_000110242.1.6877 WP_000110242.1.69359 WP_000110242.1.69655 WP_000110242.1.70694 WP_000110242.1.71023 WP_000110242.1.71690 WP_000110242.1.72028 WP_000110242.1.72182 WP_000110242.1.72947 WP_000110242.1.73129 WP_000110242.1.73843 WP_000110242.1.73847 WP_000110242.1.74624 WP_000110242.1.74929 WP_000110242.1.75272 WP_000110242.1.75626 WP_000110242.1.77267 WP_000110242.1.77295 WP_000110242.1.7808 WP_000110242.1.79105 WP_000110242.1.79965 WP_000110242.1.80255 WP_000110242.1.8106 WP_000110242.1.81410 WP_000110242.1.81438 WP_000110242.1.82439 WP_000110242.1.83180 WP_000110242.1.83781 WP_000110242.1.84172 WP_000110242.1.84397 WP_000110242.1.84745 WP_000110242.1.84850 WP_000110242.1.84994 WP_000110242.1.85568 WP_000110242.1.86234 WP_000110242.1.8832 WP_000110242.1.88980 WP_000110242.1.89119 WP_000110242.1.89255 WP_000110242.1.8945 WP_000110242.1.89479 WP_000110242.1.90270 WP_000110242.1.90389 WP_000110242.1.90424 WP_000110242.1.90453 WP_000110242.1.90951 WP_000110242.1.91278 WP_000110242.1.9131 WP_000110242.1.91534 WP_000110242.1.91621 WP_000110242.1.92318 WP_000110242.1.92615 WP_000110242.1.92705 WP_000110242.1.93059 WP_000110242.1.93339 WP_000110242.1.93705 WP_000110242.1.93994 WP_000110242.1.94072 WP_000110242.1.94836 WP_000110242.1.94889 WP_000110242.1.95691 WP_000110242.1.9627 WP_000110242.1.9657 WP_000110242.1.97047 WP_000110242.1.97369 WP_000110242.1.99057 gi|525811200|ref|YP_008248823.1|

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