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Domain assignment for WP_000128354.1.87272 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_000128354.1.87272
Domain Number 1 Region: 200-247
Classification Level Classification E-value
Superfamily Homeodomain-like 0.000000017
Family AraC type transcriptional activator 0.014
Further Details:      
 
Domain Number 2 Region: 147-196
Classification Level Classification E-value
Superfamily Homeodomain-like 0.00000358
Family AraC type transcriptional activator 0.043
Further Details:      
 
Weak hits

Sequence:  WP_000128354.1.87272
Domain Number - Region: 299-361
Classification Level Classification E-value
Superfamily PX domain 0.0085
Family PX domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_000128354.1.87272
Sequence length 701
Comment AraC family transcriptional regulator [Staphylococcus aureus]; AA=GCF_900098195.1; RF=na; TAX=1280; STAX=1280; NAME=Staphylococcus aureus; strain=GKP138-41; AL=Contig; RT=Major
Sequence
MTCQLKIHHTLSTIPSRNINNIMVLFSLTSKLNITINGETKDVSNYIILINHGDIYNINH
GENIIELMIPVFYFYQQDDDFFNGYLDRHLLQSSNYIKSLIADLISTPTRSSLMGKNIGQ
SIIDTLLKEAFIRIDHEYLPNIALSNPVFIDCVNYIHDNIDAHLSLKDIAMHCNISESYC
SNLFVRYLSMNFKDYFTSIKLVNAINLLLSTKHSITTVSELAGFNSHTNFANQFKNYLHF
SPKQFRSLVSKITEPPQIHFQQDNVSQFTELISTIDLTAQLATNTTDIHIDDFNPKDRSQ
RAKVFVRFSNFNELFQFIFNEYYDINFEHLPKPVVFIDDIHDIEISQTNYNLLNRCFEKL
FEKNIGLAIAIKSTQQFETMKQLILTFLQGNQDYKTSKKLVKFMLVFCSNSMTAEEIHLC
HLKIKNKNKEIKYSVTVDGFLETYSTVEQVYDVMQRLKFHYYFIDIENSKTATHLITKNQ
HYHQTDTHFEQYKKFILDSGISSTQFVYNNLSVSGFKYTNDGKNPIQLSDIVYHLIALLR
YGGGISYQLLDDHSNYISLYNKYGSPLPLMHLYKMFRPFVNEDIEITNNYVLSRKDNNYH
FLLFNKINDRYMSDVKQDFIFHNELPQDSLMIIKTLNHEHGSIQHLLPISDQLVYIEKEI
LDELDKTNYPKTELAVQEETGRTFELKLNHDEVKYICFKPS
Download sequence
Identical sequences A0A0H3K4C6 A0A2H4QQ36
gi|49487163|ref|YP_044384.1| 196620.MW2301 282459.SAS2271 gi|21284030|ref|NP_647118.1| WP_000128354.1.101330 WP_000128354.1.101406 WP_000128354.1.101598 WP_000128354.1.102066 WP_000128354.1.11228 WP_000128354.1.1457 WP_000128354.1.15241 WP_000128354.1.15753 WP_000128354.1.17050 WP_000128354.1.18567 WP_000128354.1.19022 WP_000128354.1.20690 WP_000128354.1.2434 WP_000128354.1.24503 WP_000128354.1.28866 WP_000128354.1.28915 WP_000128354.1.29315 WP_000128354.1.29716 WP_000128354.1.30496 WP_000128354.1.31212 WP_000128354.1.31426 WP_000128354.1.31505 WP_000128354.1.33765 WP_000128354.1.34334 WP_000128354.1.36932 WP_000128354.1.38390 WP_000128354.1.38862 WP_000128354.1.38960 WP_000128354.1.43530 WP_000128354.1.44899 WP_000128354.1.46195 WP_000128354.1.47493 WP_000128354.1.47541 WP_000128354.1.53323 WP_000128354.1.53418 WP_000128354.1.54446 WP_000128354.1.57196 WP_000128354.1.57723 WP_000128354.1.58419 WP_000128354.1.58538 WP_000128354.1.61009 WP_000128354.1.61897 WP_000128354.1.65046 WP_000128354.1.65600 WP_000128354.1.6612 WP_000128354.1.74273 WP_000128354.1.74761 WP_000128354.1.76149 WP_000128354.1.78598 WP_000128354.1.79270 WP_000128354.1.81010 WP_000128354.1.83066 WP_000128354.1.85160 WP_000128354.1.85292 WP_000128354.1.8551 WP_000128354.1.86606 WP_000128354.1.87272 WP_000128354.1.88753 WP_000128354.1.88761 WP_000128354.1.9055 WP_000128354.1.9071 WP_000128354.1.90923 WP_000128354.1.92918 WP_000128354.1.92960 WP_000128354.1.93736 WP_000128354.1.97444 WP_000128354.1.98497

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