SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_000269448.1.42941 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_000269448.1.42941
Domain Number 1 Region: 113-284
Classification Level Classification E-value
Superfamily DNA-glycosylase 1.01e-36
Family DNA repair glycosylase, 2 C-terminal domains 0.0024
Further Details:      
 
Weak hits

Sequence:  WP_000269448.1.42941
Domain Number - Region: 57-100
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 0.0549
Family Type II restriction endonuclease effector domain 0.039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_000269448.1.42941
Sequence length 287
Comment MULTISPECIES: DNA-3-methyladenine glycosylase [Bacillus]; AA=GCF_002071845.1; RF=na; TAX=155322; STAX=155322; NAME=Bacillus toyonensis; strain=VU-DES13; AL=Scaffold; RT=Major
Sequence
MWSEHVTLEYPYHFEEVLKRLSFDPLNVIQLDEKVIYVPLCIDEEQVVVRLQGIGTVQNP
QFWISSQTGDPEKVMKRMRAIFHWNEPFQDIQNHFLNTSLRPLFETYAYTPIILEFDYFA
CLLRCIIHQQINLKFATVLTEQFVKRYGTEKNGVFFFPTPEIVANISIEELREQKFSQRK
AEYIVGLAERIARGTLDLASIETGTEEEVSAQLLPIRGIGAWTVQNFLMFGLGRKNMFPK
ADIGIQRAVQGVFQLDDKPDDAFLENVKQECEPYCSYAALYLWKSIE
Download sequence
Identical sequences A0A0M0MKS7 A0A1D3PT88 A0A2B4T456 C2WYA8 R8MB18
gi|557622619|ref|YP_008783751.1| WP_000269448.1.100771 WP_000269448.1.13424 WP_000269448.1.14084 WP_000269448.1.24792 WP_000269448.1.24969 WP_000269448.1.24992 WP_000269448.1.30144 WP_000269448.1.3196 WP_000269448.1.37661 WP_000269448.1.42182 WP_000269448.1.42941 WP_000269448.1.4453 WP_000269448.1.46586 WP_000269448.1.474 WP_000269448.1.499 WP_000269448.1.54419 WP_000269448.1.55893 WP_000269448.1.5841 WP_000269448.1.64770 WP_000269448.1.66535 WP_000269448.1.70209 WP_000269448.1.75358 WP_000269448.1.75374 WP_000269448.1.84323 WP_000269448.1.86041 WP_000269448.1.89698 WP_000269448.1.93904 WP_000269448.1.94270

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]