SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_000960612.1.54116 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  WP_000960612.1.54116
Domain Number - Region: 204-253
Classification Level Classification E-value
Superfamily MHC antigen-recognition domain 0.0864
Family MHC antigen-recognition domain 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_000960612.1.54116
Sequence length 334
Comment MULTISPECIES: hypothetical protein [Bacillus cereus group]; AA=GCF_000290775.1; RF=na; TAX=1053239; STAX=1396; NAME=Bacillus cereus VD156; strain=VD156; AL=Scaffold; RT=Major
Sequence
MLVLCEFCRDMVRYSTKDVSKVTVIRGKQYHYVGKEANCEECKSEIFVPNIHDYNLEQLD
HAYRQQEQLVTISEIREVLEKYKIGKRPLSLLLGWGEVTLTRYVNGDIPTKQYSDILKRL
GRDQSFMLDILERNKDLITQKAYRVSKEAIAKLQENSDIPSTQTTKIEEVANYLLYKNDD
ITPLALQKLLYYAQGFCKVFTGTYLFEDDCEVGSHGPVYRVIFNKYKVYQYDNLEVSYVS
TNQLTQIEKEILDCVMNTLGCYSGKSLEKMILFDLPWEVAHLELEDNGPGKPIMEKEEID
NCFNTMKQAYNLVTISDIKKYGIKAFDNINNSML
Download sequence
Identical sequences A0A2H2W544 J8GKC0 J8KWR5
WP_000960612.1.54116 WP_000960612.1.7544 WP_000960612.1.87873 WP_000960612.1.98053

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]