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Domain assignment for WP_001045622.1.10147 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_001045622.1.10147
Domain Number 1 Region: 614-770
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 1.16e-29
Family Adhesin YadA, collagen-binding domain 0.00011
Further Details:      
 
Domain Number 2 Region: 237-374
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 2.75e-26
Family Adhesin YadA, collagen-binding domain 0.00034
Further Details:      
 
Domain Number 3 Region: 394-506
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.0000000000000353
Family Adhesin YadA, collagen-binding domain 0.00048
Further Details:      
 
Domain Number 4 Region: 124-215
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.0000000000379
Family Adhesin YadA, collagen-binding domain 0.0029
Further Details:      
 
Domain Number 5 Region: 527-611
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.0000000000785
Family Adhesin YadA, collagen-binding domain 0.003
Further Details:      
 
Domain Number 6 Region: 921-990
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.00000000034
Family Adhesin YadA, collagen-binding domain 0.0084
Further Details:      
 
Weak hits

Sequence:  WP_001045622.1.10147
Domain Number - Region: 769-871
Classification Level Classification E-value
Superfamily Apolipoprotein 0.0129
Family Apolipoprotein 0.027
Further Details:      
 
Domain Number - Region: 983-1041
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.0549
Family Intermediate filament protein, coiled coil region 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_001045622.1.10147
Sequence length 1143
Comment hypothetical protein, partial [Acinetobacter baumannii]; AA=GCF_000787355.1; RF=na; TAX=470; STAX=470; NAME=Acinetobacter baumannii; strain=BJ8; AL=Contig; RT=Major
Sequence
MNKVYKVIWNASIGAWVATSEIAKSKTKTKSKTLNVSAAVLSGVICFAPNAFAGTNTEGG
IGQGTSISGTTSCREGSANTANQKDIAIGCGAQTQDRTGSNIANRNNPYNNSTGAYAGAM
KQGGAISVGTGAVVEKGLGTAIGSYATTQGISGVAIGTGALSSGNTALAVGRQSAATADF
SQAIGNVAAATGKGSLAIGHSATAEGYRSIAIGSPDIENADPVAGQVGAAYQPKMATKAT
GKDSIAFGGGAVATEENALAIGAFSESKGKKSVAIGTGAKAQKDNAVVIGDQAEASFEGG
VAIGKGARSEAENSIALGKDSKASQATGESYLTKQSAPTGVLSIGDIGTERRIQNVADGA
ADSDAATVRQLKAARTHYVSINDNGQQGGNFENDGATGRNAIAVGVNASAAGREAMAIGG
SAQAIGSGAIAMGSSSQTVGRGDVAIGRNASTQGAEGVNSNQSVAIGDQTKAIGDQSVAI
GADVIAKGNSSVAIGGDDVDKIARDTELSNTYTEITGGTLQAGKYPTTEANHGSTAVGVQ
AVGTGAFSSAFGMTSKATGDASSAFGVMSNASGKGAAAFGAVAQATGDGASAMGINSLAS
GTNSTAIGSGNKPGEGAKATGNSSAAIGSGAQATGDNSAAIGKGAEATNENAAAVGGGAK
ATGKNAAAIGGGAIADQENAVAVGQGAQSLVEGGVALGARSKVEAKNSVALGQDAVATEA
TGTSFLTNRDASQSNGVISVGSAGKERRITNVEDGSADSDAVTVRQLKNVDSRVNQNTSN
IGKNTQNITNLNQKLDDTKTNLGNQITDTNKNLNDAKKDLGIQITDTNTKLNTTKDQLTT
QINDTKTELNNTIGNTKTELNTKIDNTKTELENKGLNFAGNSGADVHRKLGDKLNIVGGA
AASTPAAKTSGENIITRTTQDGIQIELLKDSKFDSVTTGNTTLNTNGLTIKEGPSITKQG
INAGSKQITNVADGINAKDAVNVDQLTKVKENLNGRITDTNNQLNDAKKDLGNQIADTNK
NLNDAKKDLGDQITDTNTKLNNTKDQLTTQINDTKTELNNTIGNTKTELENKGLNFAGNS
GSDVHRKLGDKLNIVGGAAASTPTAKTSGENVITRTTKDGIQIELLKDSKFDSVTTGNTT
LNT
Download sequence
Identical sequences WP_001045622.1.10147 WP_001045622.1.21264 WP_001045622.1.25971 WP_001045622.1.33929 WP_001045622.1.36569 WP_001045622.1.52840 WP_001045622.1.53424 WP_001045622.1.64907 WP_001045622.1.89199 WP_001045622.1.90310 WP_001045622.1.9233 WP_001045622.1.96556

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