SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_001045628.1.99833 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_001045628.1.99833
Domain Number 1 Region: 614-770
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 2.22e-29
Family Adhesin YadA, collagen-binding domain 0.00011
Further Details:      
 
Domain Number 2 Region: 237-374
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 4.32e-26
Family Adhesin YadA, collagen-binding domain 0.00034
Further Details:      
 
Domain Number 3 Region: 1769-1858
Classification Level Classification E-value
Superfamily Pili subunits 2.67e-16
Family YadA C-terminal domain-like 0.0024
Further Details:      
 
Domain Number 4 Region: 394-505
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.000000000000102
Family Adhesin YadA, collagen-binding domain 0.00048
Further Details:      
 
Domain Number 5 Region: 123-216
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.000000000122
Family Adhesin YadA, collagen-binding domain 0.0029
Further Details:      
 
Domain Number 6 Region: 527-611
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.000000000144
Family Adhesin YadA, collagen-binding domain 0.003
Further Details:      
 
Domain Number 7 Region: 921-990
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.000000000432
Family Adhesin YadA, collagen-binding domain 0.0084
Further Details:      
 
Domain Number 8 Region: 1119-1187
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.00000000144
Family Adhesin YadA, collagen-binding domain 0.012
Further Details:      
 
Domain Number 9 Region: 1521-1557
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.00000157
Family Adhesin YadA, collagen-binding domain 0.0099
Further Details:      
 
Domain Number 10 Region: 1290-1384
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.0000196
Family Adhesin YadA, collagen-binding domain 0.019
Further Details:      
 
Weak hits

Sequence:  WP_001045628.1.99833
Domain Number - Region: 1589-1629
Classification Level Classification E-value
Superfamily Adhesin YadA, collagen-binding domain 0.000288
Family Adhesin YadA, collagen-binding domain 0.011
Further Details:      
 
Domain Number - Region: 769-871
Classification Level Classification E-value
Superfamily Apolipoprotein 0.0235
Family Apolipoprotein 0.027
Further Details:      
 
Domain Number - Region: 1004-1053
Classification Level Classification E-value
Superfamily Intermediate filament protein, coiled coil region 0.0994
Family Intermediate filament protein, coiled coil region 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_001045628.1.99833
Sequence length 1862
Comment hypothetical protein [Acinetobacter baumannii]; AA=GCF_900117565.1; RF=na; TAX=470; STAX=470; NAME=Acinetobacter baumannii; strain=Ab41; AL=Scaffold; RT=Major
Sequence
MNKVYKVIWNASIGAWVATSEIAKSKTKTKSKTLNVSAAVLSGVICFAPNAFAGTNTEGG
IGQGTSISGTTSCREGSANTANQKDIAIGCGAQTQDRTGSNIANRNNPYNNSTGAYAGAM
KQGGAISVGTGAVVEKGLGTAIGSYATTQGISGVAIGTGALSSGNTALAVGRQSAATADF
SQAIGNVAAATGKGSLAIGHSATAEGYRSIAIGSPDIENADPVAGQVGAAYQPKMATKAT
GKDSIAFGGGAVATEENALAIGAFSESKGKKSVAIGTGAKAQKDNAVVIGDQAEASFEGG
VAIGKGARSEAENSIALGKDSKASQATGESYLTKQSAPTGVLSIGDIGTERRIQNVADGA
ADSDAATVRQLKAARTHYVSINDNGQQGGNFENDGATGRNAIAVGVNASAAGREAMAIGG
SAQAIGSGAIAMGSSSQTVGRGDVAIGRNASTQGAEGVNSNQSVAIGDQTKAIGDQSVAI
GADVIAKGNSSVAIGGDDVDKIARDTELSNTYTEITGGTLQAGKYPTTEANHGSTAVGVQ
AVGTGAFSSAFGMTSKATGDASSAFGVMSNASGKGAAAFGAVAQATGDGASAMGINSLAS
GTNSTAIGSGNKPGEGAKATGNSSAAIGSGAQATGDNSAAIGKGAEATNENAAAVGGGAK
ATGKNAAAIGGGAIADQENAVAVGQGAQSLVEGGVALGARSKVEAKNSVALGQDAVATEA
TGTSFLTNRDASQSNGVISVGSAGKERRITNVEDGSADSDAVTVRQLKNVDSRVNQNTSN
IGKNTQNITNLNQKLDDTKTNLGNQITDTNKNLNDAKKDLGIQITDTNTKLNTTKDQLTT
QINDTKTELNNTIGNTKTELNTKIDNTKTELENKGLNFAGNSGADVHRKLGDKLNIVGGA
AASTPAAKTSGENIITRTTQDGIQIELLKDSKFDSVTTGNTTLNTNGLTIKEGPSITKQG
INAGSKQITNVADGINAKDAVNVDQLTKVKENLNGRITDTNNQLNDAKKDLGNQIADTNK
NLNDAKKDLGDQITDTNTKLNNTKDQLTTQINDTKTELNNTIGNTKTELENKGLNFAGNS
GSDVHRKLGDKLNIVGGAAASTPTAKTSGENVITRTTKDGIQIELLKDSKFDSVTTGNTT
LNTNGLTIKEGPSITKDGINAGGKKITNVADGINAKDAVNKSQLDNLAAKQNATDDAAVK
YDDAKTKDKVTLKGKDGTVLDNVKAGHISSTSKEAVNGSQIHNISNSIKNSIGGNTVVNP
DGSLTTSNIGGTGKNNINDAISEVKNTAKKAKTTVTEGDNIVVKETVNKDGSTNYEVSTK
KDLTLNSVTTGDSVLNNNGLTIKDGPSITKDGINAGGKKITDVANGVIAQNSKDAVNGGQ
VHHISNSIKNSIGGNTVVNPDGSLTTNNIGGTGKNNINDAIKSVDEKVTNGVNDLTQKGL
NFGANDQKTTQGKAVHRKLGDTINIVGGANPETAEDKTSGENIITRTTEDGVKIEMLKDV
KFDSVNVGGHVLNQQGLTIKGGPSITVNGINAGGKQITNVADGINAKDAVNKGQLDKQIN
EVKDQIGKDIGKLSDHAVQYDKDKNGNVDKNSVTLGGGEKGTNLKNVADGKIAEGSKDAV
NGGQLWNVQNQVDKNSNDIKNIQNNIDNISNGKAGLVQQQKPNGEITVGKDSGGTSINMA
GKEGDRVVQGVKDGEIKAGSNQAVNGGQIHKISESIKNSIGGNTTIDPKDGSITTNNIGG
TGKNNINDAIGTLNQSNQELGNKITNLGDQLQQVFYDTNKRIDDVEKKANAGIAAAMALE
NAPFVAGKYTYAVGAAYHGGENAVGVTLRKTSDNGRWSITGGVAAASQGEPSVRVGISGV
IN
Download sequence
Identical sequences WP_001045628.1.100568 WP_001045628.1.10466 WP_001045628.1.10852 WP_001045628.1.11203 WP_001045628.1.11698 WP_001045628.1.11925 WP_001045628.1.12414 WP_001045628.1.1270 WP_001045628.1.13894 WP_001045628.1.15383 WP_001045628.1.15821 WP_001045628.1.16325 WP_001045628.1.16993 WP_001045628.1.17433 WP_001045628.1.17468 WP_001045628.1.17646 WP_001045628.1.18082 WP_001045628.1.18755 WP_001045628.1.19877 WP_001045628.1.2033 WP_001045628.1.21112 WP_001045628.1.21337 WP_001045628.1.21484 WP_001045628.1.21689 WP_001045628.1.29123 WP_001045628.1.30611 WP_001045628.1.3144 WP_001045628.1.32028 WP_001045628.1.33714 WP_001045628.1.34394 WP_001045628.1.35715 WP_001045628.1.35717 WP_001045628.1.3758 WP_001045628.1.38748 WP_001045628.1.38901 WP_001045628.1.39680 WP_001045628.1.40832 WP_001045628.1.4086 WP_001045628.1.42708 WP_001045628.1.42928 WP_001045628.1.43203 WP_001045628.1.44664 WP_001045628.1.44684 WP_001045628.1.44816 WP_001045628.1.46413 WP_001045628.1.46474 WP_001045628.1.46518 WP_001045628.1.47552 WP_001045628.1.48115 WP_001045628.1.48457 WP_001045628.1.49405 WP_001045628.1.49896 WP_001045628.1.49928 WP_001045628.1.52189 WP_001045628.1.5281 WP_001045628.1.53023 WP_001045628.1.53762 WP_001045628.1.5489 WP_001045628.1.55363 WP_001045628.1.56027 WP_001045628.1.57408 WP_001045628.1.58061 WP_001045628.1.58621 WP_001045628.1.5908 WP_001045628.1.60116 WP_001045628.1.60243 WP_001045628.1.60581 WP_001045628.1.60589 WP_001045628.1.60669 WP_001045628.1.63219 WP_001045628.1.64218 WP_001045628.1.65005 WP_001045628.1.65058 WP_001045628.1.66142 WP_001045628.1.66806 WP_001045628.1.67656 WP_001045628.1.68087 WP_001045628.1.68132 WP_001045628.1.68225 WP_001045628.1.68428 WP_001045628.1.69121 WP_001045628.1.6952 WP_001045628.1.69586 WP_001045628.1.69815 WP_001045628.1.71413 WP_001045628.1.71823 WP_001045628.1.73341 WP_001045628.1.74819 WP_001045628.1.76101 WP_001045628.1.7866 WP_001045628.1.79028 WP_001045628.1.793 WP_001045628.1.80665 WP_001045628.1.82848 WP_001045628.1.83400 WP_001045628.1.85168 WP_001045628.1.86277 WP_001045628.1.86385 WP_001045628.1.86715 WP_001045628.1.87830 WP_001045628.1.88115 WP_001045628.1.89611 WP_001045628.1.90953 WP_001045628.1.91085 WP_001045628.1.91335 WP_001045628.1.91502 WP_001045628.1.91854 WP_001045628.1.9714 WP_001045628.1.98561 WP_001045628.1.98919 WP_001045628.1.99391 WP_001045628.1.99449 WP_001045628.1.99833 gi|184157313|ref|YP_001845652.1| 405416.ACICU_00993

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]