SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_001645954.1.67988 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_001645954.1.67988
Domain Number 1 Region: 179-394
Classification Level Classification E-value
Superfamily Restriction endonuclease-like 3.06e-74
Family Type II restriction endonuclease catalytic domain 0.0000000548
Further Details:      
 
Domain Number 2 Region: 3-172
Classification Level Classification E-value
Superfamily DNA-binding pseudobarrel domain 9.42e-57
Family Type II restriction endonuclease effector domain 0.000000579
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_001645954.1.67988
Sequence length 402
Comment hypothetical protein [Salmonella enterica]; AA=GCF_002050915.1; RF=na; TAX=286780; STAX=28901; NAME=Salmonella enterica subsp. enterica serovar Miami; strain=00-0507; AL=Contig; RT=Major
Sequence
MSGLHSWLLDKSTSDTYMFIKRLSANDTGATGGHQVGIYIPSGIVEHLFPSINHTRDLNP
SVTLNAHTSSHSCPDSEARAVYYNGRFFGKTRNEKRITRWGGGKNPLQISENTGALALLA
FDHRQGVDSQCVDIWVCHDAEEEDIVESSLGEIVPGSLVYGPANEILGGLALKEPVSSGY
CLPEEWRTNFPSGKEIIQYAAAHYSPNVVGPDKQLIERRRVEYEIFLLVEEMHVLGIVQS
GFGSVNEFIALANSVSNRRKSRAGKSLELHLEQLFNEYGLKTFETQAVTEGNKKPDFLFP
SAQAYHDEAFPEQKLRMLAVKTTCKDRWRQILNEADRIQDIYLFTLQEGVSVAQFQEMQQ
ERVRLVVPSSLHDKYPKAIREYLISLETFIDETKSLYADEII
Download sequence
Identical sequences A0A1S0ZE82 G5QNQ7
WP_001645954.1.11041 WP_001645954.1.113 WP_001645954.1.11444 WP_001645954.1.16201 WP_001645954.1.18895 WP_001645954.1.19970 WP_001645954.1.21181 WP_001645954.1.22855 WP_001645954.1.24727 WP_001645954.1.25596 WP_001645954.1.27169 WP_001645954.1.30389 WP_001645954.1.32038 WP_001645954.1.32054 WP_001645954.1.32459 WP_001645954.1.33114 WP_001645954.1.34647 WP_001645954.1.35125 WP_001645954.1.35294 WP_001645954.1.36564 WP_001645954.1.4088 WP_001645954.1.5301 WP_001645954.1.53274 WP_001645954.1.59562 WP_001645954.1.61200 WP_001645954.1.61434 WP_001645954.1.67988 WP_001645954.1.68075 WP_001645954.1.7316 WP_001645954.1.76346 WP_001645954.1.7893 WP_001645954.1.82144 WP_001645954.1.83572 WP_001645954.1.85654 WP_001645954.1.86126 WP_001645954.1.91914 WP_001645954.1.9253 WP_001645954.1.94588 WP_001645954.1.95803 WP_001645954.1.99198

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]