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Domain assignment for WP_001890309.1.78740 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  WP_001890309.1.78740
Domain Number - Region: 140-189
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 0.0334
Family BCR-homology GTPase activation domain (BH-domain) 0.015
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_001890309.1.78740
Sequence length 721
Comment C4-dicarboxylate ABC transporter permease [Vibrio cholerae]; AA=GCF_001718095.1; RF=na; TAX=666; STAX=666; NAME=Vibrio cholerae; strain=L15; AL=Contig; RT=Major
Sequence
MSRCWSNAMSNSVEQELEKFEVPTRTRFGWVTRTISVLCVLLSLAHIWFNTLSTWSELWI
SAIHFAGFAMICALWYPALPRWRESKVALAFDVLLALLALACLIYLMLAEDALYERGVKF
VTSDWVFSILAILIVMEMIRRTMGWFIPTLILICLTYVSVWGKWAGGIFHFPGLSAETLL
YRSFYSSEGMFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIA
VLASGLMGSVSGSSVANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAG
AFIMASYTQIPYVDIVAVSFIPALIYFLSVAFFVRIEAKRMGVQIVTTSQEPFMKVLLSG
WHNLIPLAVLVTLLVVGFTPTYAAGLSILSVIVASWFSKNHKMGPKAIIEALEQGAKNMA
TTAVLLVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPVTAA
YIVLGTLSAPALYKLLAESQLVDLMVSGQLPEQAKAIFMLAAPDQLSLLNAPMAAEKAHE
LISLVPADFVETLLQQSLGLEAIGLALLSAHLIIFWLSQDSNVTPPVCLTAFAAATIAKT
PPMRTGFTAWKIAKGLYLVPVLIAYTQLISWDATTVVTIGIFAIFGTYAMIGAIEGYLEG
RLNLLWRLLLAVIGVLLVWPNLPIWIRLVCVALFIAIFIYSGKTAARVERAHSAVRGAKS
A
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Identical sequences WP_001890309.1.14179 WP_001890309.1.15134 WP_001890309.1.26223 WP_001890309.1.28508 WP_001890309.1.34261 WP_001890309.1.36322 WP_001890309.1.43222 WP_001890309.1.47794 WP_001890309.1.56807 WP_001890309.1.65528 WP_001890309.1.70775 WP_001890309.1.78428 WP_001890309.1.78740 WP_001890309.1.89719 WP_001890309.1.96693 WP_001890309.1.99861

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