SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_003087469.1.57065 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_003087469.1.57065
Domain Number 1 Region: 232-540
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 1.18e-76
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0000251
Further Details:      
 
Weak hits

Sequence:  WP_003087469.1.57065
Domain Number - Region: 144-180
Classification Level Classification E-value
Superfamily GAT-like domain 0.0942
Family Phosphoinositide-binding clathrin adaptor, domain 2 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_003087469.1.57065
Sequence length 541
Comment MULTISPECIES: chemotaxis transducer [Pseudomonas]; AA=GCF_001921025.1; RF=na; TAX=287; STAX=287; NAME=Pseudomonas aeruginosa; strain=TRN6598; AL=Scaffold; RT=Major
Sequence
MSLRSMPIATRAALSFALITALLVITGIFSLNRMGSLNEASSDISDNWLPSVRESAELNV
LLAELRQVQLAHVLAADDSSKRFLESRMTEIGKELTDREGAYQRLISGADERSIYERYLA
TRQTLLQSQQTLVQMSRSKPLEETRQYTESTLLDQYRATQQQLQALIDFNVKGASQASHT
ADEVYHSAFAAVIGVLLVAGLATVVLAWLFTRSITQPIGEALRVAEVIASGDLTSRIDTS
GRDEPAKLLVALQGMQAQLRQTIQQIGSSATQLASAAEELSAVTEQGNRSLTQQNDEIQM
AATAVNEMTAAVEEVARNASSTSDASSASEQSAQNGRQRVLETVQAIRLMSEEVDNTSAL
VGGLAEKAQDISKVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRT
QESTREIEQMIANIQEGTGAAVGAMDSSSVRARNMLEIAEAAGLALNEIAERVGQINERT
LVIASASEQQAQVAREVDRNLVNIRDISLQTSAGSNQTAAASQELSQLAIDLNNMVTRFV
V
Download sequence
Identical sequences A0A0H2Z8Y8 A0A157W391 A0A2I5LJD1 V6AH03
gi|386065438|ref|YP_005980742.1| 208963.PA14_43710 WP_003087469.1.100278 WP_003087469.1.100469 WP_003087469.1.101590 WP_003087469.1.10174 WP_003087469.1.101781 WP_003087469.1.10248 WP_003087469.1.10271 WP_003087469.1.10575 WP_003087469.1.10895 WP_003087469.1.11130 WP_003087469.1.11318 WP_003087469.1.1183 WP_003087469.1.12150 WP_003087469.1.12660 WP_003087469.1.12890 WP_003087469.1.12930 WP_003087469.1.13077 WP_003087469.1.13085 WP_003087469.1.13266 WP_003087469.1.13364 WP_003087469.1.13533 WP_003087469.1.13642 WP_003087469.1.13718 WP_003087469.1.13743 WP_003087469.1.14116 WP_003087469.1.14251 WP_003087469.1.14679 WP_003087469.1.14690 WP_003087469.1.15408 WP_003087469.1.15666 WP_003087469.1.16751 WP_003087469.1.16811 WP_003087469.1.17108 WP_003087469.1.17177 WP_003087469.1.17189 WP_003087469.1.17223 WP_003087469.1.17499 WP_003087469.1.1758 WP_003087469.1.18054 WP_003087469.1.18156 WP_003087469.1.18157 WP_003087469.1.18440 WP_003087469.1.18508 WP_003087469.1.18732 WP_003087469.1.18907 WP_003087469.1.19089 WP_003087469.1.19199 WP_003087469.1.19351 WP_003087469.1.19640 WP_003087469.1.2012 WP_003087469.1.20590 WP_003087469.1.20825 WP_003087469.1.20880 WP_003087469.1.20890 WP_003087469.1.21002 WP_003087469.1.2237 WP_003087469.1.23264 WP_003087469.1.24413 WP_003087469.1.24940 WP_003087469.1.2530 WP_003087469.1.25641 WP_003087469.1.26010 WP_003087469.1.27288 WP_003087469.1.27549 WP_003087469.1.28757 WP_003087469.1.28878 WP_003087469.1.29008 WP_003087469.1.29070 WP_003087469.1.29440 WP_003087469.1.29633 WP_003087469.1.29650 WP_003087469.1.29973 WP_003087469.1.30020 WP_003087469.1.3030 WP_003087469.1.30563 WP_003087469.1.30615 WP_003087469.1.30842 WP_003087469.1.31457 WP_003087469.1.31563 WP_003087469.1.31633 WP_003087469.1.31655 WP_003087469.1.31732 WP_003087469.1.31751 WP_003087469.1.32235 WP_003087469.1.32359 WP_003087469.1.32626 WP_003087469.1.33047 WP_003087469.1.33294 WP_003087469.1.33438 WP_003087469.1.33728 WP_003087469.1.33833 WP_003087469.1.3385 WP_003087469.1.33945 WP_003087469.1.34150 WP_003087469.1.34203 WP_003087469.1.34556 WP_003087469.1.34583 WP_003087469.1.35442 WP_003087469.1.35529 WP_003087469.1.3555 WP_003087469.1.35968 WP_003087469.1.36064 WP_003087469.1.36267 WP_003087469.1.36285 WP_003087469.1.373 WP_003087469.1.37416 WP_003087469.1.3742 WP_003087469.1.37571 WP_003087469.1.37698 WP_003087469.1.38023 WP_003087469.1.38335 WP_003087469.1.38816 WP_003087469.1.38932 WP_003087469.1.39765 WP_003087469.1.39920 WP_003087469.1.40237 WP_003087469.1.40271 WP_003087469.1.40442 WP_003087469.1.40984 WP_003087469.1.41110 WP_003087469.1.41137 WP_003087469.1.41199 WP_003087469.1.41429 WP_003087469.1.42316 WP_003087469.1.42388 WP_003087469.1.42499 WP_003087469.1.42690 WP_003087469.1.42723 WP_003087469.1.4273 WP_003087469.1.42870 WP_003087469.1.43212 WP_003087469.1.43286 WP_003087469.1.43326 WP_003087469.1.43729 WP_003087469.1.43756 WP_003087469.1.43998 WP_003087469.1.44269 WP_003087469.1.44486 WP_003087469.1.44552 WP_003087469.1.44725 WP_003087469.1.44870 WP_003087469.1.45604 WP_003087469.1.45611 WP_003087469.1.45700 WP_003087469.1.45946 WP_003087469.1.46306 WP_003087469.1.4640 WP_003087469.1.46935 WP_003087469.1.47551 WP_003087469.1.48472 WP_003087469.1.48579 WP_003087469.1.48810 WP_003087469.1.48840 WP_003087469.1.48851 WP_003087469.1.49108 WP_003087469.1.49806 WP_003087469.1.50450 WP_003087469.1.51957 WP_003087469.1.52372 WP_003087469.1.52403 WP_003087469.1.52409 WP_003087469.1.52500 WP_003087469.1.52591 WP_003087469.1.52850 WP_003087469.1.5289 WP_003087469.1.52939 WP_003087469.1.53586 WP_003087469.1.53946 WP_003087469.1.54076 WP_003087469.1.55387 WP_003087469.1.55813 WP_003087469.1.56626 WP_003087469.1.57020 WP_003087469.1.57065 WP_003087469.1.57369 WP_003087469.1.57921 WP_003087469.1.58200 WP_003087469.1.58360 WP_003087469.1.58510 WP_003087469.1.58581 WP_003087469.1.5869 WP_003087469.1.58800 WP_003087469.1.58944 WP_003087469.1.5897 WP_003087469.1.59339 WP_003087469.1.59385 WP_003087469.1.59943 WP_003087469.1.60084 WP_003087469.1.60472 WP_003087469.1.616 WP_003087469.1.62703 WP_003087469.1.62961 WP_003087469.1.63739 WP_003087469.1.63929 WP_003087469.1.63941 WP_003087469.1.64544 WP_003087469.1.64605 WP_003087469.1.6461 WP_003087469.1.64611 WP_003087469.1.64886 WP_003087469.1.65312 WP_003087469.1.65457 WP_003087469.1.65478 WP_003087469.1.65632 WP_003087469.1.65679 WP_003087469.1.66088 WP_003087469.1.66155 WP_003087469.1.66563 WP_003087469.1.66693 WP_003087469.1.67124 WP_003087469.1.67874 WP_003087469.1.6796 WP_003087469.1.68172 WP_003087469.1.68446 WP_003087469.1.68448 WP_003087469.1.68499 WP_003087469.1.68790 WP_003087469.1.68979 WP_003087469.1.6911 WP_003087469.1.70331 WP_003087469.1.70537 WP_003087469.1.70650 WP_003087469.1.71249 WP_003087469.1.71290 WP_003087469.1.71412 WP_003087469.1.71610 WP_003087469.1.7163 WP_003087469.1.72183 WP_003087469.1.7219 WP_003087469.1.72662 WP_003087469.1.72782 WP_003087469.1.72920 WP_003087469.1.73035 WP_003087469.1.74281 WP_003087469.1.74326 WP_003087469.1.74685 WP_003087469.1.7501 WP_003087469.1.75389 WP_003087469.1.75431 WP_003087469.1.75603 WP_003087469.1.7568 WP_003087469.1.75756 WP_003087469.1.76077 WP_003087469.1.76141 WP_003087469.1.76775 WP_003087469.1.77442 WP_003087469.1.78118 WP_003087469.1.78288 WP_003087469.1.78599 WP_003087469.1.79003 WP_003087469.1.79060 WP_003087469.1.79286 WP_003087469.1.79754 WP_003087469.1.8013 WP_003087469.1.80258 WP_003087469.1.8038 WP_003087469.1.80683 WP_003087469.1.80715 WP_003087469.1.80785 WP_003087469.1.80926 WP_003087469.1.81338 WP_003087469.1.81349 WP_003087469.1.8141 WP_003087469.1.81426 WP_003087469.1.81470 WP_003087469.1.81856 WP_003087469.1.81874 WP_003087469.1.81927 WP_003087469.1.82798 WP_003087469.1.82810 WP_003087469.1.83267 WP_003087469.1.83440 WP_003087469.1.83460 WP_003087469.1.83503 WP_003087469.1.8351 WP_003087469.1.83540 WP_003087469.1.83871 WP_003087469.1.83937 WP_003087469.1.84526 WP_003087469.1.84558 WP_003087469.1.84825 WP_003087469.1.85150 WP_003087469.1.85638 WP_003087469.1.85920 WP_003087469.1.85978 WP_003087469.1.86243 WP_003087469.1.8645 WP_003087469.1.86506 WP_003087469.1.86595 WP_003087469.1.86665 WP_003087469.1.86796 WP_003087469.1.86970 WP_003087469.1.87463 WP_003087469.1.8785 WP_003087469.1.87888 WP_003087469.1.87975 WP_003087469.1.88540 WP_003087469.1.89480 WP_003087469.1.90272 WP_003087469.1.91012 WP_003087469.1.91236 WP_003087469.1.91392 WP_003087469.1.91796 WP_003087469.1.91882 WP_003087469.1.9219 WP_003087469.1.92630 WP_003087469.1.93196 WP_003087469.1.93520 WP_003087469.1.93568 WP_003087469.1.93889 WP_003087469.1.94078 WP_003087469.1.94288 WP_003087469.1.94333 WP_003087469.1.94742 WP_003087469.1.94881 WP_003087469.1.95782 WP_003087469.1.96058 WP_003087469.1.961 WP_003087469.1.96863 WP_003087469.1.97503 WP_003087469.1.97784 WP_003087469.1.985 WP_003087469.1.98873 WP_003087469.1.98963 WP_003087469.1.99065 WP_003087469.1.99378 WP_003087469.1.99772 gi|116049553|ref|YP_791643.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]