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Domain assignment for WP_003209289.1.39434 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003209289.1.39434
Domain Number 1 Region: 326-635
Classification Level Classification E-value
Superfamily Methyl-accepting chemotaxis protein (MCP) signaling domain 1.1e-78
Family Methyl-accepting chemotaxis protein (MCP) signaling domain 0.0000172
Further Details:      
 
Weak hits

Sequence:  WP_003209289.1.39434
Domain Number - Region: 106-190
Classification Level Classification E-value
Superfamily Oxygen-evolving enhancer protein 3, 0.0549
Family Oxygen-evolving enhancer protein 3, 0.027
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_003209289.1.39434
Sequence length 635
Comment methyl-accepting chemotaxis protein [Pseudomonas fluorescens]; AA=GCF_000297195.2; RF=na; TAX=463794; STAX=294; NAME=Pseudomonas fluorescens BBc6R8; strain=BBc6R8; AL=Contig; RT=Major
Sequence
MFRPLTRLLGNISISLKLALGFGLVLSLSLIIASTGWQALSASLERSQKLTTLSQLAVVG
EELRADRIVYRTLNDPASLSKIELHMDKIDQFLVDLSPRFTDLVNQQQLQESRRFVTSFK
TALSGLEGLIKQREDAREQLKRSSIQSSDSLSELSSNLPNQDDEKALDAVEQLRQAMEQA
EDRAQSPAWAAASLDAYTNGVSEALLALDGAQAAVGALPVDASALKKALLDFRTHLTRLK
DAQLSTETTQNQLEQWLDKLLTESDLLSQDQTAKRDKEASLARTLLLNVTAAALLLGVVA
AWLIAGQIVAPLRQALSVANRIAEGDLSHDIQASRQDELGQLQRSIGQMTLNLRGLISGI
GDSAQQIASAAEQLSAVTEQTRDGVDGQKQETEQVATAMNEMLATSQEVARHAEQASLAA
AEADRQAGQGDQVVAEAITHIEHLAQEMARSSQAMQGLQQESRKIGSVLEVIKSVSEQTN
LLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQQSAEEIEELISGLHRGTQQVADIMD
NSRSLTDNSVQLTRRAGEALAGITRTVSVIQEMNPQIAAAAEEQTAVAEEINRSVLKVKD
VSEQTWAASQDTAAASVELARLGADLQVWVGKFKV
Download sequence
Identical sequences V7DZM7
WP_003209289.1.39434

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