SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_003325062.1.70004 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_003325062.1.70004
Domain Number 1 Region: 429-576
Classification Level Classification E-value
Superfamily Nucleotide cyclase 5.1e-40
Family GGDEF domain 0.0001
Further Details:      
 
Domain Number 2 Region: 128-280
Classification Level Classification E-value
Superfamily GAF domain-like 0.000000000000446
Family GAF domain 0.01
Further Details:      
 
Domain Number 3 Region: 251-411
Classification Level Classification E-value
Superfamily GAF domain-like 0.00000000102
Family GAF domain 0.016
Further Details:      
 
Weak hits

Sequence:  WP_003325062.1.70004
Domain Number - Region: 87-143
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 0.051
Family BCR-homology GTPase activation domain (BH-domain) 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_003325062.1.70004
Sequence length 581
Comment MULTISPECIES: GGDEF domain-containing protein [Bacillus subtilis group]; AA=GCF_000204905.1; RF=na; TAX=876283; STAX=1452; NAME=Bacillus atrophaeus BACI051-N; strain=BACI051-N; AL=Contig; RT=Major
Sequence
MINQTKHILPIFHQRMLHFLLTMPKSVTFADSLLWLTSALESCFSSLLLTLLPAESAQTK
YKTEEEACFAATKISGSFYVISDHSTGSSLNLTCKQGEEIPAELPDLISLFLNQSMKQEK
LYEAAVHQKKIYKLTELFHSLLDQKKVLKKLLESLNDAYPSFHFSLFISQDRDTCRDLPA
KELLMEGEGADSFALHVYLSGEILRKNESAVYVPIKGQQGTYGVLMAEAKSGVPLSAGDL
DEMSLIANAAGRAFENAQLYEQSKTSIANLELINETSRQLNQRLRLTDTMKDLTARIVES
FHAEEVGFFHIDHFEKQTLLPGGTPFFEKGSSDVYIRSVKEKLFDGEKGVFIGNGRSLFG
EESYGSLMAVPMMENDRILGFAIVLKKDLYAFTFEVYKLFEALIHHSTLAVTNSMLRDRL
EHLVKTDQLTELYSRTYLDEKIQYSMKTHQRGVFILIDIDNFKNVNDTYGHQTGDEILIQ
VAAVIKSNIRKHDIGARWGGEELAIYLPMLNVAAGKRIAQRLVRAVRESTKPEVTISCGI
SCWTAEARKSLKELVQQADEALYTAKRSGKNRLIIHGTSSQ
Download sequence
Identical sequences A0A080UK05 A0A0H3E512
gi|311069451|ref|YP_003974374.1| WP_003325062.1.100936 WP_003325062.1.10353 WP_003325062.1.16994 WP_003325062.1.32777 WP_003325062.1.39473 WP_003325062.1.39900 WP_003325062.1.40255 WP_003325062.1.59507 WP_003325062.1.62747 WP_003325062.1.68581 WP_003325062.1.69262 WP_003325062.1.70004 WP_003325062.1.72589 WP_003325062.1.72801 WP_003325062.1.7305 WP_003325062.1.7508 WP_003325062.1.79721 WP_003325062.1.99425

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]