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Domain assignment for WP_003330645.1.357 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  WP_003330645.1.357
Domain Number - Region: 233-282
Classification Level Classification E-value
Superfamily Kix domain of CBP (creb binding protein) 0.00706
Family Kix domain of CBP (creb binding protein) 0.012
Further Details:      
 
Domain Number - Region: 320-365
Classification Level Classification E-value
Superfamily lambda repressor-like DNA-binding domains 0.00731
Family SinR domain-like 0.078
Further Details:      
 
Domain Number - Region: 271-320
Classification Level Classification E-value
Superfamily BAR/IMD domain-like 0.0575
Family BAR domain 0.036
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_003330645.1.357
Sequence length 433
Comment RNA polymerase sigma-54 factor [Bacillus azotoformans]; AA=GCF_000307855.1; RF=representative genome; TAX=1131731; STAX=1454; NAME=Bacillus azotoformans LMG 9581; strain=LMG 9581; AL=Contig; RT=Major
Sequence
MEQGLFQNQRLQLVITNKMEQQLSLLHMPMVELERFLMDQALENPLIDMESFDNNHLILK
KHQNDKNSEKDWLNNIEQPRNLYDFLLEQLSFLTLKPKEQEIMEYLIFLVDENGYFQGDL
QDVSKHFAVPVDLVEQALYRLQTFEPIGVGARTLQECILLQIRDVSNHNELAELVVAHYF
ELLVERKWREISNKMGVDITEIQNVFDLLKNLNPRPASSYQNDYPQLIKPELIISEDRQG
FIVKINNALYPKLSCDSYYNERMDQLSKYDQSNYLTEKYEHLNWLKKSIEKRKTTLVRVM
QAIIDKQNDFFQKGTSYLKPLTIKEIAELVELHESTVSRAVNGKYVQTPHGLFELKYFFT
SSISTNGNDEISSEIVKDLIVEIVKNENKSKPLSDQKILDILSANEGLTLTRRTVTKYRE
QLGVPSSSKRKRY
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Identical sequences K6E3Y7
WP_003330645.1.357

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