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Domain assignment for WP_003469204.1.52260 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003469204.1.52260
Domain Number 1 Region: 1-136
Classification Level Classification E-value
Superfamily CheY-like 5.12e-27
Family CheY-related 0.0014
Further Details:      
 
Domain Number 2 Region: 474-523
Classification Level Classification E-value
Superfamily Homeodomain-like 0.000000000448
Family AraC type transcriptional activator 0.018
Further Details:      
 
Domain Number 3 Region: 423-470
Classification Level Classification E-value
Superfamily Homeodomain-like 0.0000134
Family AraC type transcriptional activator 0.023
Further Details:      
 
Weak hits

Sequence:  WP_003469204.1.52260
Domain Number - Region: 322-382
Classification Level Classification E-value
Superfamily GAT-like domain 0.0942
Family GAT domain 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_003469204.1.52260
Sequence length 529
Comment DNA-binding response regulator [Clostridium perfringens]; AA=GCF_001949695.1; RF=na; TAX=1502; STAX=1502; NAME=Clostridium perfringens; strain=JFP978; AL=Contig; RT=Major
Sequence
MFKVIIADDEKIVRIAMRNIIDWESHGFNIVGLAQDGSEVLNILNENGADLIITDLKMKG
LNGIELIDKLKEENFRGKILVLSNHGEYELVREAMKKGADDYLLKITLRPKELEDIIDKF
RESLEERKEEEEKEAQFKNEFDKTKKLAEISLLKEYLKDDLSYEELLNEFPKINFLDDNC
EYYTGACIYIDNYKKIYEEKIKDKNKLAITIENIIKEEFSVNGVKIIPINNHKYIFISKM
DFNSLKIKTINIQNLIMLYLNIKVSAVLIKRIKSVKGLKESFKKVEEILSLKFYGKENFL
IISEEFLGFGDAIKLRKEVTDAILENIELGEISANKELIKEFARRCSNMNVKPSTLINYV
NFMCELIENHEYVQDDLNGIKELKGKILKSDNIEELINNSTLLIDYINQRYIKSKELSYK
KEVNEIIKFIEKNIDKRITLVMVANAVNLNESYLSRIFKNETGKNLMYFINEVKMKKAKE
LLKQQDTLVKEVANSIGMTDQFYFNRVFKKFYGVSPSKFKKDYSNKVLS
Download sequence
Identical sequences WP_003469204.1.20964 WP_003469204.1.27257 WP_003469204.1.30163 WP_003469204.1.39851 WP_003469204.1.52260 WP_003469204.1.5234 WP_003469204.1.52659 WP_003469204.1.68380

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