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Domain assignment for WP_003517480.1.55520 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_003517480.1.55520
Domain Number 1 Region: 5-315
Classification Level Classification E-value
Superfamily (Trans)glycosidases 5.37e-96
Family NagZ-like 0.0000716
Further Details:      
 
Domain Number 2 Region: 316-553
Classification Level Classification E-value
Superfamily Beta-D-glucan exohydrolase, C-terminal domain 8.63e-59
Family Beta-D-glucan exohydrolase, C-terminal domain 0.0016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_003517480.1.55520
Sequence length 755
Comment glycosyl hydrolase [Ruminiclostridium thermocellum]; AA=GCF_000255575.1; RF=na; TAX=1094188; STAX=1515; NAME=Ruminiclostridium thermocellum YS; strain=YS; AL=Contig; RT=Major
Sequence
MAVDIKKIIKQMTLEEKAGLCSGLDFWHTKPVERLGIPSIMMTDGPHGLRKQREDAEIAD
INNSVPATCFPSAAGLACSWDRELVERVGAALGEECQAENVSILLGPGANIKRSPLCGRN
FEYFSEDPYLSSELAASHIKGVQSQGVGACLKHFAANNQEHRRMTVDTIVDERTLREIYF
ASFENAVKKARPWVVMCAYNKLNGEYCSENRYLLTEVLKNEWMHDGFVVSDWGAVNDRVS
GLDAGLDLEMPTSHGITDKKIVEAVKSGKLSENILNRAVERILKVIFMALENKKENAQYD
KDAHHRLARQAAAESMVLLKNEDDVLPLKKSGTIALIGAFVKKPRYQGSGSSHITPTRLD
DIYEEIKKAGGDKVNLVYSEGYRLENDGIDEELINEAKKAASSSDVAVVFAGLPDEYESE
GFDRTHMSIPENQNRLIEAVAEVQSNIVVVLLNGSPVEMPWIDKVKSVLEAYLGGQALGG
ALADVLFGEVNPSGKLAETFPVKLSHNPSYLNFPGEDDRVEYKEGLFVGYRYYDTKGIEP
LFPFGHGLSYTKFEYSDISVDKKDVSDNSIINVSVKVKNVGKMAGKEIVQLYVKDVKSSV
RRPEKELKGFEKVFLNPGEEKTVTFTLDKRAFAYYNTQIKDWHVESGEFLILIGRSSRDI
VLKESVRVNSTVKIRKRFTVNSAVEDVMSDSSAAAVLGPVLKEITDALQIDMDNAHDMMA
ANIKNMPLRSLVGYSQGRLSEEMLEELVDKINNVE
Download sequence
Identical sequences P14002
CmR59 203119.Cthe_1256 gi|385778356|ref|YP_005687521.1| WP_003517480.1.16390 WP_003517480.1.19387 WP_003517480.1.20586 WP_003517480.1.31213 WP_003517480.1.55520 WP_003517480.1.60145 WP_003517480.1.6636 WP_003517480.1.6965 gi|125973771|ref|YP_001037681.1|

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