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Domain assignment for WP_004041780.1.66890 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_004041780.1.66890
Domain Number 1 Region: 81-178
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.72e-20
Family Cold shock DNA-binding domain-like 0.00015
Further Details:      
 
Domain Number 2 Region: 1-77
Classification Level Classification E-value
Superfamily N-terminal, heterodimerisation domain of RBP7 (RpoE) 5.23e-18
Family N-terminal, heterodimerisation domain of RBP7 (RpoE) 0.00031
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_004041780.1.66890
Sequence length 190
Comment MULTISPECIES: DNA-directed RNA polymerase [Haloferax]; AA=GCF_000337315.1; RF=na; TAX=309800; STAX=2246; NAME=Haloferax volcanii DS2; strain=DS2; AL=Contig; RT=Major
Sequence
MYKRVRLKDTVEVPPRHLGDVTPERVKRLLQDKLEGRMDEDVGSVVSVVNVNDIGEGTVL
PNRPGVYYEADFDAITYDPDMQEVVDGIVVEVVEFGAFVGIGPVDGLLHVSQISDEYLAY
DGENQQLASTESNQTLAVDDEVRARIVTKSIDERNPRDSKIGLTAKQPGLGKHGWLESKR
QQSEASAEGN
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Identical sequences A0A0D6JLY7 A0A0K1ITN6 A0A0W1RP06 D4GTD2 L5NYN4 L9VCR8 M0FDE2 M0GAW2 M0GBA6 M0GW87 M0H651 M0HXI1 M0I1F9 M0JH75
gi|292656032|ref|YP_003535929.1| WP_004041780.1.100717 WP_004041780.1.102041 WP_004041780.1.19539 WP_004041780.1.55509 WP_004041780.1.58052 WP_004041780.1.641 WP_004041780.1.66890 WP_004041780.1.67236 WP_004041780.1.70129 WP_004041780.1.81341 WP_004041780.1.84848 WP_004041780.1.87772 WP_004041780.1.89511 WP_004041780.1.98617 WP_004041780.1.99677

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