SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_004820683.1.19192 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  WP_004820683.1.19192
Domain Number - Region: 263-341,370-439
Classification Level Classification E-value
Superfamily VPS9 domain 0.0405
Family VPS9 domain 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_004820683.1.19192
Sequence length 566
Comment hypothetical protein [Acinetobacter guillouiae]; AA=GCF_000368485.1; RF=representative genome; TAX=1217656; STAX=106649; NAME=Acinetobacter guillouiae NIPH 991; strain=NIPH 991; AL=Scaffold; RT=Major
Sequence
MNTTIIPYQTRATLLQLEPSTDLNWEQVLCDVFDEANIEVREEIERQILRPKEIQWNKGN
NSFEFKITNSLENLKYSFENERMRSIATKLSNSINWLKNITDSIQIADYLENALYQIDLI
SVDDHLNLQRDKLLIRRVFLQDVAKLIRTLNIEAPAGIRNLTSDQIKCFIIEVFIKQQLL
GYWFKPLLTKSSELMKRPFFKYFILREQRIRKFEIVKTSEFIYLIAPIENFEQNPYSIRR
FLFEENIEYKNQVYVTGLVLDTDQMSESEYRDSTDFLIQKMVTIQHQVHRDVIEIVQEFE
EFTENKLLPFLMEPLGMVGKNSDTVAQNHIKTIEQLLTANILMPLRNAVKSDLSHIEEFE
YLFMSVHRIFSEILSHYRDFKEQPALFFNSHVQLFEYRLLAYLKLLEKRKDEIFIPMSSQ
EWQVMHERSQQPIRKLQEIIAEQVKDYRALDSYVKQLKNEQHEVEGSLLKKMIKGGKVEK
DIVQANHAAMLIKKQTYLEVLTVPKGLAKYSVFIEFESLTSMSELERHYAFPSGDNGIIR
FPYLMKLPENLADFDLEEFNASINDD
Download sequence
Identical sequences N8YB36
WP_004820683.1.19192

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]