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Domain assignment for WP_005087400.1.41513 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_005087400.1.41513
Domain Number 1 Region: 36-123,192-269
Classification Level Classification E-value
Superfamily DPP6 N-terminal domain-like 0.000051
Family DPP6 N-terminal domain-like 0.049
Further Details:      
 
Weak hits

Sequence:  WP_005087400.1.41513
Domain Number - Region: 433-469
Classification Level Classification E-value
Superfamily BRK domain-like 0.0209
Family BRK domain-like 0.0073
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_005087400.1.41513
Sequence length 510
Comment type IV secretion protein Rhs [Shigella flexneri]; AA=GCF_001017355.1; RF=na; TAX=42897; STAX=623; NAME=Shigella flexneri 2a; strain=BS1041; AL=Contig; RT=Major
Sequence
MTLHRQPGGEGYYYQWGWYEGPDDAAWRVTGHHTDSGEQYRLAWDLAQRRLCVTDGLGRT
RYHQWDAQNQVTAYQDEAGQVTTFRWSDEERLLLGMTDPQGGKWRYVYDLQGHITETHDP
LGRVEQAQWHPVWHQPETEVDAAGNLLGRRAGERATAENSVVPFNRLMSYRGVHYRYDEF
GRAVEKEGRSGTQSYRYDAEHRMVEVTTARGTYRYVYDALGRRTEKQHISPDGKPYNRTK
FLWDGMRLAQESRPEGTGSLYIYRDQGSYEPLARVDKAGKEGPNRILYFHTDVNGAPEEM
TDSDGKIVWETGYQVWGNTIQEKDHGGVEQNLRYQGQYLDRETGLHYNLHRYYDPDVGRF
MVTDPIGLRGGLNLYSYAPNPLKYADPLGLTPCAVSNQKANRLLDSSETKVTVRSRSDAE
QLFMDRYLGHNYKNMTGESGPSTKNLMEYLTENKTKAGSYHWDDIKDPSVTKPSYRVSGH
GPGNPDGDLPHLQVHQHGGSVRHIFFPWET
Download sequence
Identical sequences WP_005087400.1.22409 WP_005087400.1.41513 WP_005087400.1.57348 WP_005087400.1.58136 WP_005087400.1.66059 WP_005087400.1.83340 WP_005087400.1.90065

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