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Domain assignment for WP_005372905.1.51667 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_005372905.1.51667
Domain Number 1 Region: 260-428,456-599
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 3.18e-69
Family L-arabinose binding protein-like 0.000028
Further Details:      
 
Weak hits

Sequence:  WP_005372905.1.51667
Domain Number - Region: 211-238
Classification Level Classification E-value
Superfamily BRK domain-like 0.0301
Family BRK domain-like 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_005372905.1.51667
Sequence length 603
Comment penicillin-binding protein activator [Vibrio alginolyticus]; AA=GCF_002119505.1; RF=na; TAX=663; STAX=663; NAME=Vibrio alginolyticus; strain=K01M1; AL=Complete Genome; RT=Major
Sequence
MINHKRLSVPRILTPVALAITLAACSSGPRQPDGVDVTLEPTQSVQNYMIQADSTEGSLQ
NDWLIMATKAAIQANQFDQAEMLIKRLARQQLTEVQQAEWQLARATIQQKQGNYSQLLQL
LNFKPWWKLPNEQWKDYYLMRADAYQGLNQAFEANRQLVAFGQYASSAEQREISSRIWMN
FGSYSEYELTSLETEPNEDVLDGWLQLAIYAKTLSGNLSQLKNTLERWLNENPSHPAAIY
TPEEIQNILSLDIVKPNNTALLLPLTGKFSPQAQLIRDGFVFAMMNDRNRDPSATLTVID
TNAYNADQIKQRLINENIDFVVGPLEKENVELLHTTMDGSENGPTIPALALNIPEDVQPD
SNICYLALSPEQEAAQAAKHLFSEGYNFPLILAPKGSFGERVTEAFNKEWRKYSSNKVAA
SYFGDKRQLQKDINEVFGLQESKQRIAQMQSLMRIKLETQPRSRRDVDAVYIVARSTELT
LIKPFIEVAINPDAKAPQIFSSSRSNSGGATYEDLTGIIYSDIPLLIDPDPSVTAEMNEL
WSEQSNMEKRLKALGMDAYKLIGELPQMKVVPGYSVGGQTGILSIDNNCVVQRELSWAER
GAL
Download sequence
Identical sequences A0A034T7M8 A0A0H0YF87 A0A2I3CEG9 D0X0D5
WP_005372905.1.11784 WP_005372905.1.15699 WP_005372905.1.18388 WP_005372905.1.23210 WP_005372905.1.24121 WP_005372905.1.31008 WP_005372905.1.33421 WP_005372905.1.43162 WP_005372905.1.4511 WP_005372905.1.49504 WP_005372905.1.51667 WP_005372905.1.54915 WP_005372905.1.58614 WP_005372905.1.59902 WP_005372905.1.6150 WP_005372905.1.63946 WP_005372905.1.70945 WP_005372905.1.77537 WP_005372905.1.82060 WP_005372905.1.86697 WP_005372905.1.86758 WP_005372905.1.88573 WP_005372905.1.97071 WP_005372905.1.99004 gi|543944498|ref|YP_008536954.1|

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