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Domain assignment for WP_005458195.1.15831 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_005458195.1.15831
Domain Number 1 Region: 260-428,456-599
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 2.4e-69
Family L-arabinose binding protein-like 0.0000414
Further Details:      
 
Weak hits

Sequence:  WP_005458195.1.15831
Domain Number - Region: 211-238
Classification Level Classification E-value
Superfamily BRK domain-like 0.0262
Family BRK domain-like 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_005458195.1.15831
Sequence length 603
Comment MULTISPECIES: penicillin-binding protein activator [Vibrio]; AA=GCF_000707345.1; RF=na; TAX=670; STAX=670; NAME=Vibrio parahaemolyticus; strain=CFSAN012494; AL=Contig; RT=Major
Sequence
MINHKRLSVPRILTPVALAITLAACSSGPRQPDGVDVTLEPTQSVQNYMIQADSTEGSLQ
NDWLIMATKAAIQANQLDQADLLIKRLARQQLTEVQQAEWQLARATIQQKQGDYSQLLQL
LNFKPWWKLPNEQWKDYYSLRADAYQSLNQPFEANRQLVAFSQYASSAEQREISSRIWMN
FGSYSEYELTSLQTEPSEDVLDGWLQLAVYAKTLSGNLSQLKNTLERWLNENPSHPAAIY
TPEEIQNILSLDIVKPNNTALLLPLTGKFAPQAQLIRDGFVFAMMNDRNRDPSATLTVID
TNAYSADEVKQRLINENIDFVVGPLQKENVELLQTTMDGSANSPAIPALALNIPEDVQPG
TDICYLALSPEQEVAQAAKYLFSEGYSFPLILAPKGSYGERVVQAFNEEWSKYSSNKVAT
SYFGDKRQLQKDINDVFGLQESKQRIAQMQSLMRIKLETQPRSRRDVDAVYIVARSSELT
LIKPFIEVAINPDAKPPKLFSNSRSNSGGATYEDLTGIIYSDIPLLVNPDPIVTAEMNEL
WADQSNMEKRLKALGMDAYKLIGELPQMKVVPGYSVSGQTGTLSIDNNCVVQRELSWAER
GAL
Download sequence
Identical sequences A0A0F6LPV1 A0A0L8A348 A6B5X6 Q87SH4
NYSGRC-SEC-28897223 NP_796828.1.6614 WP_005458195.1.100929 WP_005458195.1.10139 WP_005458195.1.101585 WP_005458195.1.10531 WP_005458195.1.10550 WP_005458195.1.10999 WP_005458195.1.11770 WP_005458195.1.12087 WP_005458195.1.12533 WP_005458195.1.12691 WP_005458195.1.14243 WP_005458195.1.14638 WP_005458195.1.15211 WP_005458195.1.15258 WP_005458195.1.1555 WP_005458195.1.15563 WP_005458195.1.15831 WP_005458195.1.16176 WP_005458195.1.16503 WP_005458195.1.16556 WP_005458195.1.16742 WP_005458195.1.1836 WP_005458195.1.18767 WP_005458195.1.19074 WP_005458195.1.19755 WP_005458195.1.20587 WP_005458195.1.20749 WP_005458195.1.21130 WP_005458195.1.21927 WP_005458195.1.22008 WP_005458195.1.22207 WP_005458195.1.22854 WP_005458195.1.22951 WP_005458195.1.23232 WP_005458195.1.23592 WP_005458195.1.24866 WP_005458195.1.2532 WP_005458195.1.25390 WP_005458195.1.25529 WP_005458195.1.25940 WP_005458195.1.26080 WP_005458195.1.26245 WP_005458195.1.264 WP_005458195.1.26729 WP_005458195.1.27000 WP_005458195.1.27256 WP_005458195.1.2846 WP_005458195.1.28858 WP_005458195.1.29193 WP_005458195.1.29928 WP_005458195.1.3137 WP_005458195.1.31746 WP_005458195.1.31829 WP_005458195.1.31998 WP_005458195.1.32539 WP_005458195.1.3498 WP_005458195.1.35596 WP_005458195.1.35751 WP_005458195.1.35973 WP_005458195.1.36558 WP_005458195.1.36788 WP_005458195.1.37148 WP_005458195.1.37683 WP_005458195.1.37812 WP_005458195.1.37931 WP_005458195.1.3810 WP_005458195.1.38633 WP_005458195.1.39 WP_005458195.1.39142 WP_005458195.1.39379 WP_005458195.1.3961 WP_005458195.1.39756 WP_005458195.1.39791 WP_005458195.1.39842 WP_005458195.1.42292 WP_005458195.1.42393 WP_005458195.1.42776 WP_005458195.1.42858 WP_005458195.1.42872 WP_005458195.1.43185 WP_005458195.1.43895 WP_005458195.1.4519 WP_005458195.1.45497 WP_005458195.1.45633 WP_005458195.1.45978 WP_005458195.1.46057 WP_005458195.1.4734 WP_005458195.1.47510 WP_005458195.1.48035 WP_005458195.1.4861 WP_005458195.1.48612 WP_005458195.1.48684 WP_005458195.1.4902 WP_005458195.1.49432 WP_005458195.1.49920 WP_005458195.1.50640 WP_005458195.1.50687 WP_005458195.1.50833 WP_005458195.1.51827 WP_005458195.1.51945 WP_005458195.1.52959 WP_005458195.1.53064 WP_005458195.1.53943 WP_005458195.1.54059 WP_005458195.1.5410 WP_005458195.1.54719 WP_005458195.1.55108 WP_005458195.1.55354 WP_005458195.1.5595 WP_005458195.1.56068 WP_005458195.1.56677 WP_005458195.1.56836 WP_005458195.1.56842 WP_005458195.1.57129 WP_005458195.1.57263 WP_005458195.1.57332 WP_005458195.1.57390 WP_005458195.1.5768 WP_005458195.1.58214 WP_005458195.1.58791 WP_005458195.1.5882 WP_005458195.1.5962 WP_005458195.1.59887 WP_005458195.1.60089 WP_005458195.1.60660 WP_005458195.1.61129 WP_005458195.1.61311 WP_005458195.1.61745 WP_005458195.1.62401 WP_005458195.1.6274 WP_005458195.1.63813 WP_005458195.1.63829 WP_005458195.1.64038 WP_005458195.1.6404 WP_005458195.1.64243 WP_005458195.1.64445 WP_005458195.1.65106 WP_005458195.1.65123 WP_005458195.1.65279 WP_005458195.1.65429 WP_005458195.1.65524 WP_005458195.1.66018 WP_005458195.1.6652 WP_005458195.1.66850 WP_005458195.1.68046 WP_005458195.1.69768 WP_005458195.1.70381 WP_005458195.1.71278 WP_005458195.1.71308 WP_005458195.1.71594 WP_005458195.1.71657 WP_005458195.1.71997 WP_005458195.1.72063 WP_005458195.1.73712 WP_005458195.1.73877 WP_005458195.1.74603 WP_005458195.1.74721 WP_005458195.1.74813 WP_005458195.1.75461 WP_005458195.1.75707 WP_005458195.1.78137 WP_005458195.1.78624 WP_005458195.1.78964 WP_005458195.1.79694 WP_005458195.1.7976 WP_005458195.1.79894 WP_005458195.1.80498 WP_005458195.1.8069 WP_005458195.1.81752 WP_005458195.1.81782 WP_005458195.1.81805 WP_005458195.1.81887 WP_005458195.1.81992 WP_005458195.1.82387 WP_005458195.1.82791 WP_005458195.1.83326 WP_005458195.1.8373 WP_005458195.1.84036 WP_005458195.1.84344 WP_005458195.1.84362 WP_005458195.1.84957 WP_005458195.1.85122 WP_005458195.1.85166 WP_005458195.1.85505 WP_005458195.1.85807 WP_005458195.1.86416 WP_005458195.1.86700 WP_005458195.1.8729 WP_005458195.1.88312 WP_005458195.1.88668 WP_005458195.1.88760 WP_005458195.1.89152 WP_005458195.1.90465 WP_005458195.1.90588 WP_005458195.1.90807 WP_005458195.1.91108 WP_005458195.1.91202 WP_005458195.1.91568 WP_005458195.1.91910 WP_005458195.1.92596 WP_005458195.1.92816 WP_005458195.1.92867 WP_005458195.1.93145 WP_005458195.1.93458 WP_005458195.1.9390 WP_005458195.1.94882 WP_005458195.1.95160 WP_005458195.1.96 WP_005458195.1.96237 WP_005458195.1.96264 WP_005458195.1.9642 WP_005458195.1.96444 WP_005458195.1.96491 WP_005458195.1.96723 WP_005458195.1.99415 WP_005458195.1.99805 223926.VP0449 gi|28897223|ref|NP_796828.1|

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