SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_005459237.1.50640 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  WP_005459237.1.50640
Domain Number - Region: 132-183
Classification Level Classification E-value
Superfamily GTPase activation domain, GAP 0.00667
Family BCR-homology GTPase activation domain (BH-domain) 0.014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_005459237.1.50640
Sequence length 707
Comment C4-dicarboxylate ABC transporter permease [Vibrio parahaemolyticus]; AA=GCF_000960685.1; RF=na; TAX=670; STAX=670; NAME=Vibrio parahaemolyticus; strain=09-4435; AL=Contig; RT=Major
Sequence
MSDSMEKELQKFELPTRTDFPWVTTTITVFGVVLSALHIWFNTLSTLPELWISATHFAGF
AVICALWYPAHISLKQSKMALAVDVLIAAGAIACLLYIPYAEDALYERGVKFVTSDWVFA
IMAILIVIELIRRTMGWFIPVLIVICLSYVVLWGKWATGIFHFPGLSMETLLYRSFYSSE
GMFGSISRISWTFVFMFILFGAFLVRSGVGDYIINVARAAAGKIIGGPGFIAVLGSGLMG
SVSGSSVANTVSTGVISIPLMQKAGFPSRFAAGVEAAASTGGQLMPPVMGAGAFIMASYT
QIPYVDIIAVSFVPALIYFLSVAFFVRIEAKRSGVQKITTSDESLIKVLVSGWHNLIPLV
VLVTLLVKGFTPTYAAGLSIISVVVSSWFSKDHKMGPKAIIEAMSQGAKNMATTAVLLVG
IGLVINVISTTGIGNTFSLMINGWANGDLFIMLVLIALASLVLGMGLPVTAAYIVLGTLS
APALYKLIAENQLLELMVSGQLPEQAKAIFMLAAPDKLDLLNAPMALETAKEMLSLVPAD
FVETLLEQSLGLEAVGLALLAAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGLM
AWKIAKGLYLVPLLIAYTGLVSWDVTSVITVGFFAIVGTYALIGAIEGYLEGPLNILMRL
VLLTIGALLVWHDIPILIRVVCCAVFVAVFVYSGRKFKLQQSQLSVL
Download sequence
Identical sequences A0A0F6LNV7 A0A0L8SIV3 A6B1L5 Q87JQ9 X7RAK3
gi|28900044|ref|NP_799699.1| NP_799699.1.6614 WP_005459237.1.100373 WP_005459237.1.101317 WP_005459237.1.101501 WP_005459237.1.101585 WP_005459237.1.10999 WP_005459237.1.12227 WP_005459237.1.14243 WP_005459237.1.15211 WP_005459237.1.15258 WP_005459237.1.1555 WP_005459237.1.15563 WP_005459237.1.16304 WP_005459237.1.16503 WP_005459237.1.16556 WP_005459237.1.16742 WP_005459237.1.1836 WP_005459237.1.18767 WP_005459237.1.19074 WP_005459237.1.19198 WP_005459237.1.19647 WP_005459237.1.19755 WP_005459237.1.1977 WP_005459237.1.20587 WP_005459237.1.21130 WP_005459237.1.22008 WP_005459237.1.22832 WP_005459237.1.22854 WP_005459237.1.22951 WP_005459237.1.23585 WP_005459237.1.23592 WP_005459237.1.24073 WP_005459237.1.24866 WP_005459237.1.25390 WP_005459237.1.25529 WP_005459237.1.26080 WP_005459237.1.26245 WP_005459237.1.264 WP_005459237.1.26729 WP_005459237.1.27000 WP_005459237.1.28415 WP_005459237.1.2846 WP_005459237.1.29695 WP_005459237.1.29928 WP_005459237.1.31267 WP_005459237.1.31829 WP_005459237.1.31998 WP_005459237.1.34889 WP_005459237.1.35320 WP_005459237.1.35351 WP_005459237.1.3554 WP_005459237.1.35596 WP_005459237.1.35751 WP_005459237.1.36558 WP_005459237.1.36619 WP_005459237.1.36788 WP_005459237.1.37148 WP_005459237.1.37683 WP_005459237.1.37737 WP_005459237.1.37931 WP_005459237.1.39 WP_005459237.1.39142 WP_005459237.1.39379 WP_005459237.1.3961 WP_005459237.1.39756 WP_005459237.1.39842 WP_005459237.1.39910 WP_005459237.1.41418 WP_005459237.1.42776 WP_005459237.1.42858 WP_005459237.1.42872 WP_005459237.1.42890 WP_005459237.1.43185 WP_005459237.1.43257 WP_005459237.1.43895 WP_005459237.1.44988 WP_005459237.1.4519 WP_005459237.1.45497 WP_005459237.1.45633 WP_005459237.1.46057 WP_005459237.1.47295 WP_005459237.1.4734 WP_005459237.1.47510 WP_005459237.1.48035 WP_005459237.1.4861 WP_005459237.1.48612 WP_005459237.1.4866 WP_005459237.1.4902 WP_005459237.1.49356 WP_005459237.1.49432 WP_005459237.1.49586 WP_005459237.1.49920 WP_005459237.1.50640 WP_005459237.1.50687 WP_005459237.1.50833 WP_005459237.1.51827 WP_005459237.1.51945 WP_005459237.1.52405 WP_005459237.1.52739 WP_005459237.1.52959 WP_005459237.1.53064 WP_005459237.1.53768 WP_005459237.1.53943 WP_005459237.1.54717 WP_005459237.1.54719 WP_005459237.1.54962 WP_005459237.1.55108 WP_005459237.1.55354 WP_005459237.1.55429 WP_005459237.1.55435 WP_005459237.1.55855 WP_005459237.1.5595 WP_005459237.1.56068 WP_005459237.1.56677 WP_005459237.1.56836 WP_005459237.1.56842 WP_005459237.1.57129 WP_005459237.1.57332 WP_005459237.1.5768 WP_005459237.1.58071 WP_005459237.1.58791 WP_005459237.1.59578 WP_005459237.1.59887 WP_005459237.1.60037 WP_005459237.1.60089 WP_005459237.1.60090 WP_005459237.1.61129 WP_005459237.1.61745 WP_005459237.1.62401 WP_005459237.1.6274 WP_005459237.1.63301 WP_005459237.1.63829 WP_005459237.1.6404 WP_005459237.1.65123 WP_005459237.1.65279 WP_005459237.1.65524 WP_005459237.1.66438 WP_005459237.1.66850 WP_005459237.1.66874 WP_005459237.1.67475 WP_005459237.1.68046 WP_005459237.1.69138 WP_005459237.1.69768 WP_005459237.1.70381 WP_005459237.1.70399 WP_005459237.1.71087 WP_005459237.1.71278 WP_005459237.1.71997 WP_005459237.1.72063 WP_005459237.1.73712 WP_005459237.1.73877 WP_005459237.1.74319 WP_005459237.1.74603 WP_005459237.1.74813 WP_005459237.1.75461 WP_005459237.1.75487 WP_005459237.1.75707 WP_005459237.1.76917 WP_005459237.1.77412 WP_005459237.1.79694 WP_005459237.1.8069 WP_005459237.1.81050 WP_005459237.1.81752 WP_005459237.1.81782 WP_005459237.1.81805 WP_005459237.1.81887 WP_005459237.1.81998 WP_005459237.1.82387 WP_005459237.1.82791 WP_005459237.1.830 WP_005459237.1.83326 WP_005459237.1.8373 WP_005459237.1.84036 WP_005459237.1.85417 WP_005459237.1.8543 WP_005459237.1.85687 WP_005459237.1.86416 WP_005459237.1.86700 WP_005459237.1.8713 WP_005459237.1.8729 WP_005459237.1.88312 WP_005459237.1.88511 WP_005459237.1.88773 WP_005459237.1.8894 WP_005459237.1.90588 WP_005459237.1.90589 WP_005459237.1.91202 WP_005459237.1.9161 WP_005459237.1.91910 WP_005459237.1.92596 WP_005459237.1.92816 WP_005459237.1.93458 WP_005459237.1.93476 WP_005459237.1.93955 WP_005459237.1.96237 WP_005459237.1.96264 WP_005459237.1.9642 WP_005459237.1.96491 WP_005459237.1.97811 WP_005459237.1.99805 223926.VPA0189

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]