SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_005485619.1.16073 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  WP_005485619.1.16073
Domain Number - Region: 199-257
Classification Level Classification E-value
Superfamily Calpain large subunit, middle domain (domain III) 0.00706
Family Calpain large subunit, middle domain (domain III) 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_005485619.1.16073
Sequence length 319
Comment lipid A biosynthesis lauroyl acyltransferase [Vibrio parahaemolyticus]; AA=GCF_000491995.1; RF=na; TAX=1394556; STAX=670; NAME=Vibrio parahaemolyticus S008; strain=S008; AL=Contig; RT=Major
Sequence
MNKYKKPEFKAKFLLPRYWGTLILIGVMYSLSLLPFDIQLALGRGIGRLAMRIMKKRQVT
IWRNLELCFPHMGESQREAILKDNIDNSGIALFETAMAWFWSDKRVSKHVTIKGMEHLEA
LEKSGRGALMLAVHSMNLELGARAFGIQKSGTGVYRPNNNPCFDYFQYKGRSRSNRTLID
RKNVKAMLEALNSGERVWYAPDHDYGNRRSTFAPLFAVKNACTTTGTSLLVDNTNCAIVP
FTMVRGEDGHYTLTIDAPVDGFPKDDPDSAAAFVNKIVETSIMASPSQYMWLHRRFKTRP
EGEDCLYKPRLVPAMDISI
Download sequence
Identical sequences WP_005485619.1.10142 WP_005485619.1.16073 WP_005485619.1.5033 WP_005485619.1.53207 WP_005485619.1.59786 WP_005485619.1.60172 WP_005485619.1.606 WP_005485619.1.63316 WP_005485619.1.66211 WP_005485619.1.94697

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]