SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_005497074.1.71210 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_005497074.1.71210
Domain Number 1 Region: 260-428,456-599
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 1.37e-69
Family L-arabinose binding protein-like 0.0000407
Further Details:      
 
Weak hits

Sequence:  WP_005497074.1.71210
Domain Number - Region: 211-238
Classification Level Classification E-value
Superfamily BRK domain-like 0.0262
Family BRK domain-like 0.0083
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_005497074.1.71210
Sequence length 603
Comment MULTISPECIES: penicillin-binding protein activator [Vibrio]; AA=GCF_001267625.1; RF=na; TAX=670; STAX=670; NAME=Vibrio parahaemolyticus; strain=S383-6; AL=Contig; RT=Major
Sequence
MINHKRLSVPRILTPVALAITLAACSSGPRQPDGVDVTLEPTQSVQNYMIQADSTEGSLQ
NDWLIMATKAAIQANQLDQADLLIKRLARQQLTEVQQAEWQLARATIQQKQGDYSQLLQL
LNFKPWWKLPNEQWKDYYSLRADAYQSLNQPFEANRQLVAFSQYASSAEQREISSRIWMN
FGSYSEYELTSLQTEPSEDVLDGWLQLAVYAKTLSGNLSQLKNTLERWLNENPSHPAAIY
TPEEIQNILSLDIVKPNNTALLLPLTGKFAPQAQLIRDGFVFAMMNDRNRDPSATLTVID
TNAYSADEVKQRLINENIDFVVGPLQKENVELLQTTMDGSANSPAIPALALNIPEDVQPG
TDICYLALSPEQEVAQAAKYLFSEGYNFPLILAPKGSYGERVVQAFNEEWSKYSSNKVAT
SYFGDKRQLQKDINDVFGLQESKQRIAQMQSLMRIKLETQPRSRRDVDAVYIVARSSELT
LIKPFIEVAINPDAKPPKLFSNSRSNSGGATYEDLTGIIYSDIPLLVNPDPIVTAEMNEL
WADQSNMEKRLKALGMDAYKLIGELPQMKVVPGYSVSGQTGTLSIDNNCVVQRELSWAER
GAL
Download sequence
Identical sequences A0A0D1F4X3 A0A243VWM5 S5J3B5
WP_005497074.1.100143 WP_005497074.1.100407 WP_005497074.1.100494 WP_005497074.1.100951 WP_005497074.1.101108 WP_005497074.1.101317 WP_005497074.1.101501 WP_005497074.1.101930 WP_005497074.1.102109 WP_005497074.1.10270 WP_005497074.1.10528 WP_005497074.1.10558 WP_005497074.1.10640 WP_005497074.1.108 WP_005497074.1.10872 WP_005497074.1.11159 WP_005497074.1.11219 WP_005497074.1.12343 WP_005497074.1.12867 WP_005497074.1.12933 WP_005497074.1.130 WP_005497074.1.13068 WP_005497074.1.13548 WP_005497074.1.13595 WP_005497074.1.14943 WP_005497074.1.15887 WP_005497074.1.16091 WP_005497074.1.16138 WP_005497074.1.17331 WP_005497074.1.17642 WP_005497074.1.1977 WP_005497074.1.22509 WP_005497074.1.22903 WP_005497074.1.234 WP_005497074.1.23585 WP_005497074.1.23858 WP_005497074.1.24049 WP_005497074.1.24359 WP_005497074.1.24486 WP_005497074.1.25315 WP_005497074.1.25430 WP_005497074.1.26160 WP_005497074.1.26203 WP_005497074.1.26685 WP_005497074.1.2670 WP_005497074.1.26700 WP_005497074.1.26870 WP_005497074.1.27033 WP_005497074.1.27735 WP_005497074.1.28753 WP_005497074.1.28926 WP_005497074.1.2908 WP_005497074.1.29398 WP_005497074.1.29784 WP_005497074.1.29877 WP_005497074.1.30198 WP_005497074.1.30327 WP_005497074.1.30764 WP_005497074.1.31513 WP_005497074.1.31646 WP_005497074.1.31765 WP_005497074.1.32328 WP_005497074.1.32508 WP_005497074.1.32844 WP_005497074.1.330 WP_005497074.1.33572 WP_005497074.1.33694 WP_005497074.1.3431 WP_005497074.1.34889 WP_005497074.1.35267 WP_005497074.1.35556 WP_005497074.1.36006 WP_005497074.1.36197 WP_005497074.1.36274 WP_005497074.1.36287 WP_005497074.1.36706 WP_005497074.1.36760 WP_005497074.1.3684 WP_005497074.1.3696 WP_005497074.1.36970 WP_005497074.1.36990 WP_005497074.1.36991 WP_005497074.1.37000 WP_005497074.1.37633 WP_005497074.1.38461 WP_005497074.1.3940 WP_005497074.1.39826 WP_005497074.1.39849 WP_005497074.1.3995 WP_005497074.1.40051 WP_005497074.1.40684 WP_005497074.1.41224 WP_005497074.1.41441 WP_005497074.1.4157 WP_005497074.1.42059 WP_005497074.1.42061 WP_005497074.1.42185 WP_005497074.1.42884 WP_005497074.1.43825 WP_005497074.1.43893 WP_005497074.1.44068 WP_005497074.1.44406 WP_005497074.1.44787 WP_005497074.1.44988 WP_005497074.1.45334 WP_005497074.1.45873 WP_005497074.1.46489 WP_005497074.1.46735 WP_005497074.1.47040 WP_005497074.1.47046 WP_005497074.1.4866 WP_005497074.1.48866 WP_005497074.1.4923 WP_005497074.1.49285 WP_005497074.1.49356 WP_005497074.1.49388 WP_005497074.1.50114 WP_005497074.1.50206 WP_005497074.1.51498 WP_005497074.1.51723 WP_005497074.1.51859 WP_005497074.1.51992 WP_005497074.1.52454 WP_005497074.1.5250 WP_005497074.1.52739 WP_005497074.1.53043 WP_005497074.1.5332 WP_005497074.1.53370 WP_005497074.1.53634 WP_005497074.1.53702 WP_005497074.1.5471 WP_005497074.1.55195 WP_005497074.1.55280 WP_005497074.1.55429 WP_005497074.1.55435 WP_005497074.1.55855 WP_005497074.1.56123 WP_005497074.1.56134 WP_005497074.1.56138 WP_005497074.1.5619 WP_005497074.1.56232 WP_005497074.1.56899 WP_005497074.1.5699 WP_005497074.1.57128 WP_005497074.1.57773 WP_005497074.1.58273 WP_005497074.1.58356 WP_005497074.1.58536 WP_005497074.1.58748 WP_005497074.1.59403 WP_005497074.1.59528 WP_005497074.1.59650 WP_005497074.1.59926 WP_005497074.1.59976 WP_005497074.1.60037 WP_005497074.1.60100 WP_005497074.1.61756 WP_005497074.1.61795 WP_005497074.1.61913 WP_005497074.1.62711 WP_005497074.1.63024 WP_005497074.1.64057 WP_005497074.1.64933 WP_005497074.1.65345 WP_005497074.1.65760 WP_005497074.1.65785 WP_005497074.1.66030 WP_005497074.1.66240 WP_005497074.1.66844 WP_005497074.1.66874 WP_005497074.1.67224 WP_005497074.1.67305 WP_005497074.1.68016 WP_005497074.1.68633 WP_005497074.1.68676 WP_005497074.1.68976 WP_005497074.1.69119 WP_005497074.1.69207 WP_005497074.1.69837 WP_005497074.1.70106 WP_005497074.1.70743 WP_005497074.1.70795 WP_005497074.1.7091 WP_005497074.1.70935 WP_005497074.1.71087 WP_005497074.1.71210 WP_005497074.1.71559 WP_005497074.1.71850 WP_005497074.1.72377 WP_005497074.1.72386 WP_005497074.1.72419 WP_005497074.1.72794 WP_005497074.1.72989 WP_005497074.1.74455 WP_005497074.1.74936 WP_005497074.1.75024 WP_005497074.1.75184 WP_005497074.1.75223 WP_005497074.1.76255 WP_005497074.1.76917 WP_005497074.1.77322 WP_005497074.1.77374 WP_005497074.1.77412 WP_005497074.1.77748 WP_005497074.1.77954 WP_005497074.1.78441 WP_005497074.1.78902 WP_005497074.1.79225 WP_005497074.1.79702 WP_005497074.1.79742 WP_005497074.1.80140 WP_005497074.1.80241 WP_005497074.1.8080 WP_005497074.1.81014 WP_005497074.1.81130 WP_005497074.1.81205 WP_005497074.1.81246 WP_005497074.1.81334 WP_005497074.1.81454 WP_005497074.1.81537 WP_005497074.1.82047 WP_005497074.1.8274 WP_005497074.1.82806 WP_005497074.1.83010 WP_005497074.1.83069 WP_005497074.1.83207 WP_005497074.1.83328 WP_005497074.1.843 WP_005497074.1.84324 WP_005497074.1.84568 WP_005497074.1.84802 WP_005497074.1.85177 WP_005497074.1.8531 WP_005497074.1.85417 WP_005497074.1.85687 WP_005497074.1.85843 WP_005497074.1.86431 WP_005497074.1.8713 WP_005497074.1.87206 WP_005497074.1.87211 WP_005497074.1.87761 WP_005497074.1.88511 WP_005497074.1.88852 WP_005497074.1.89122 WP_005497074.1.89397 WP_005497074.1.89749 WP_005497074.1.89904 WP_005497074.1.90891 WP_005497074.1.91820 WP_005497074.1.92553 WP_005497074.1.92678 WP_005497074.1.92710 WP_005497074.1.93996 WP_005497074.1.9498 WP_005497074.1.95057 WP_005497074.1.95689 WP_005497074.1.96879 WP_005497074.1.97299 WP_005497074.1.97659 WP_005497074.1.97811 WP_005497074.1.98178 WP_005497074.1.99325 WP_005497074.1.9933 WP_005497074.1.99875

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]