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Domain assignment for WP_006056468.1.71935 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_006056468.1.71935
Domain Number 1 Region: 172-256
Classification Level Classification E-value
Superfamily eIF-2-alpha, C-terminal domain 2.62e-24
Family eIF-2-alpha, C-terminal domain 0.0028
Further Details:      
 
Domain Number 2 Region: 9-95
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 8.95e-21
Family Cold shock DNA-binding domain-like 0.0015
Further Details:      
 
Domain Number 3 Region: 83-171
Classification Level Classification E-value
Superfamily eIF2alpha middle domain-like 4.12e-20
Family eIF2alpha middle domain-like 0.0039
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_006056468.1.71935
Sequence length 265
Comment translation initiation factor IF-2 subunit alpha [Halogeometricum borinquense]; AA=GCF_000337855.1; RF=na; TAX=469382; STAX=60847; NAME=Halogeometricum borinquense DSM 11551; strain=DSM 11551; AL=Contig; RT=Major
Sequence
MKYSGWPDSGELVVGKVDEITDFGVFVDLEEYEDTRGLCHISEVASGWIKNVRDHVREGQ
TVVAKVLDVDTGSQQIDLSIKDVNEHQRKEKIQEWKNEQKADKWMSLAFGEDVTDDEYSE
IANAVLAEYETLYDGFEQAAIHGVSALEDVDLDEDEVEAIVDTARQNVSVPYVNVTGYID
IRCPTGDGVDDIKEALKAAEGDDVPEEIQLEVTYVGAPEYRIKVRAPDYKTAETALEDAA
ARAKEVIESRGGTGEFHRERHEDDE
Download sequence
Identical sequences E4NS26
WP_006056468.1.71935 WP_006056468.1.94995 gi|313127247|ref|YP_004037517.1|

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