SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_011278119.1.28054 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_011278119.1.28054
Domain Number 1 Region: 85-173
Classification Level Classification E-value
Superfamily eIF2alpha middle domain-like 2.09e-24
Family eIF2alpha middle domain-like 0.0000395
Further Details:      
 
Domain Number 2 Region: 176-260
Classification Level Classification E-value
Superfamily eIF-2-alpha, C-terminal domain 2.09e-20
Family eIF-2-alpha, C-terminal domain 0.00015
Further Details:      
 
Domain Number 3 Region: 8-89
Classification Level Classification E-value
Superfamily Nucleic acid-binding proteins 1.1e-17
Family Cold shock DNA-binding domain-like 0.0000541
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_011278119.1.28054
Sequence length 263
Comment translation initiation factor IF-2 subunit alpha [Sulfolobus acidocaldarius]; AA=GCF_001560205.1; RF=na; TAX=2285; STAX=2285; NAME=Sulfolobus acidocaldarius; strain=GG12-C01-16; AL=Contig; RT=Major
Sequence
MIYNRNKFPSDGEVLVATVKQIFDYGSYVYLDEYSNLQAFLPWSEISSRWVKNIRDVLKE
DRKIVVKVIRIDRKKGTVDVSLKKVTEDEKKKKMMLWKKTQRVDKILEIVSQKLGKKEDE
AWRDIAFKLEEKYGNAFDSLLKAYKEGDKILKDAGVPDIWIKPLMEEIGKHIEEKKVKAS
DVISLRTIDPGGVEKIKKVIDTAVEKIDDLDVEVKIYTIGAPRYRIDVIGTDQKLVSNAL
QELINLIKEISQHENVTFSVVKK
Download sequence
Identical sequences A0A0U3GRC0 M1IV69 M1J1X5 Q4J9B3 V9S7K5
gi|568163897|ref|YP_008947326.1| gi|70607040|ref|YP_255910.1| gi|449067275|ref|YP_007434357.1| gi|449069546|ref|YP_007436627.1| WP_011278119.1.100797 WP_011278119.1.13097 WP_011278119.1.15291 WP_011278119.1.18585 WP_011278119.1.18739 WP_011278119.1.19907 WP_011278119.1.20267 WP_011278119.1.24072 WP_011278119.1.28054 WP_011278119.1.29213 WP_011278119.1.30898 WP_011278119.1.31299 WP_011278119.1.3283 WP_011278119.1.33024 WP_011278119.1.33782 WP_011278119.1.34459 WP_011278119.1.34536 WP_011278119.1.35781 WP_011278119.1.35800 WP_011278119.1.36276 WP_011278119.1.37881 WP_011278119.1.38112 WP_011278119.1.38253 WP_011278119.1.39308 WP_011278119.1.39398 WP_011278119.1.43265 WP_011278119.1.4394 WP_011278119.1.45682 WP_011278119.1.48356 WP_011278119.1.49892 WP_011278119.1.50721 WP_011278119.1.51246 WP_011278119.1.5150 WP_011278119.1.53520 WP_011278119.1.55288 WP_011278119.1.55517 WP_011278119.1.56706 WP_011278119.1.57256 WP_011278119.1.64117 WP_011278119.1.64360 WP_011278119.1.67449 WP_011278119.1.68798 WP_011278119.1.7301 WP_011278119.1.74875 WP_011278119.1.78046 WP_011278119.1.78998 WP_011278119.1.8042 WP_011278119.1.83345 WP_011278119.1.87279 WP_011278119.1.90653 WP_011278119.1.90680 WP_011278119.1.95134 WP_011278119.1.96274 WP_011278119.1.97501 330779.Saci_1275

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]