SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_012664977.1.100372 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  WP_012664977.1.100372
Domain Number - Region: 174-235
Classification Level Classification E-value
Superfamily Kix domain of CBP (creb binding protein) 0.0484
Family Kix domain of CBP (creb binding protein) 0.011
Further Details:      
 
Domain Number - Region: 275-353
Classification Level Classification E-value
Superfamily Translational machinery components 0.0575
Family ERF1/Dom34 middle domain-like 0.0058
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_012664977.1.100372
Sequence length 366
Comment hypothetical protein [Borreliella burgdorferi]; AA=GCF_000181855.2; RF=na; TAX=498737; STAX=139; NAME=Borrelia burgdorferi WI91-23; strain=WI91-23; AL=Scaffold; RT=Major
Sequence
MKGFPKNTKSPTCHNKHQHKLISLTSTLDYLNKKDKKYNQKNILYYYNENLKRNGLAPTT
LRTMQNYLYKLEKVLKVTTNYYQHMGVNCGTEIYYKLKYPKKECYQKINKYFKERKNSRF
KSRVNTHFKDNVSKNSSVNSVECLSNKNNIKEERKIKEIEKYQVIKYFNKSNFLCKEILP
FLLTLNVDKDTMIKIIKNTKRVENKLLKNTNLNKSCFKEKQEKLKKILNNTQKEFEQNGY
NPEQLKTNLQKVYENYKFKPHFIIERHKYNDLNNIKRKLEKSIEREKQNSQQNYQNLKEN
IFNILIEQLKKETNIEILKPIIKKYLNNQKKIEYNKVFGIYHLELLEIIKNEKNSLTTEE
FSIKAV
Download sequence
Identical sequences WP_012664977.1.100372 gi|224591527|ref|YP_002640846.1|NC_012153

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]