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Domain assignment for WP_012670294.1.64884 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  WP_012670294.1.64884
Domain Number - Region: 57-116
Classification Level Classification E-value
Superfamily PMT central region-like 0.0785
Family PMT central region-like 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_012670294.1.64884
Sequence length 864
Comment BspA family leucine-rich repeat surface protein [Brachyspira hyodysenteriae]; AA=GCF_002117515.1; RF=na; TAX=159; STAX=159; NAME=Brachyspira hyodysenteriae; strain=JR2; AL=Contig; RT=Major
Sequence
MKKYKPTTKEELKRLVFTNNGIKLGDIDTSLITDMSDLFNESKRKDFDGIEEWDTSNVEN
MSYMFAYMHYNVLGQYSMTEFNSNLNNWNVSKVKNMIYMFAGCTYFNQPLNKWDVSNVEN
MSGMFFGAKKFNQPLNNWNVSKVKDMSDMFHNCEAFNRPLDKWDVSNVKDMSNMFNVALK
FNQNINNWNVSNVEDLSKTFRYCKAFDQPLNDWDVSNVKNMQHIFEDCENFNQPLDKWDT
SNVESMEFAFRACGKFNQPLNSWNMSKVTNIEHMFAFTEEFNQPLDKWDTRNVISVMLLF
AYARKFDHYESLANWNLDSLQAISIICDDKDMDKLPTRIQVYRQAFFPKADIISITKFNV
KEIYELIADDKNKKVVRLKKRLESDFSSELSFVTNNYNFKTIEKAEKYAERNYNAKKYDK
KLEFIKNCPVLVKDKSREVNINLIKYIYSEYLSLKKTIKKLEKIDNMVNLLDLKSFVNFT
KEIYLKNQDEVITAFVYAMYGGDEALKKISELMNTIESKNLLTMISFNIESRYAQSLLYK
IYLNSTKSAIRKEAVEMINELLEKINIGYTEFRLRCMPNLGFNSKGEKELNKDYKLIVNN
DYTLSLFDIKNNKELKKVPQNLDKKLKDKIKELGKEADKFINHSSHILSIMLIDGDILSY
DLFKEVFIDNYLMNKFGSDLIWNLYDKDKNFITTFRYTNDGKYLNTENEKIKINADNFMS
LATPIEMDDETIDKCRKQLEDSQLSQPINQLTSIKLNKDNLKKEIKKIKNIDTSYGAFKF
FAQKYDMHTNDVLGDNDTITYTFTANDGDIFTMSAKVDEDVEYDDLINISIDFKKAENKK
EISKRFVYTFLVFIILDFRLADLF
Download sequence
Identical sequences C0QZF7
gi|225619692|ref|YP_002720949.1| WP_012670294.1.100804 WP_012670294.1.11734 WP_012670294.1.28499 WP_012670294.1.45318 WP_012670294.1.54887 WP_012670294.1.64247 WP_012670294.1.64884 WP_012670294.1.67878 WP_012670294.1.68614 WP_012670294.1.75576 WP_012670294.1.85211 WP_012670294.1.89179 565034.BHWA1_00752

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