SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_013000106.1.93747 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_013000106.1.93747
Domain Number 1 Region: 38-163
Classification Level Classification E-value
Superfamily Ricin B-like lectins 1.18e-41
Family Ricin B-like 0.0000135
Further Details:      
 
Domain Number 2 Region: 191-459
Classification Level Classification E-value
Superfamily Arabinanase/levansucrase/invertase 1.88e-25
Family Levansucrase 0.053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) WP_013000106.1.93747
Sequence length 475
Comment alpha-L-arabinofuranosidase [Streptomyces scabiei]; AA=GCF_001579685.1; RF=na; TAX=1930; STAX=1930; NAME=Streptomyces scabiei; strain=96-06; AL=Contig; RT=Major
Sequence
MYRLSLSRRRPSAVLTAAIAALTALAAILVASPAQAATTSAVRGVASGRCLDVSGAGQTE
GTNVQIWDCHGGTNQQWTLTDGNQLTVYGNKCLDVPGHATAAGIRPVIWSCNGGTNQQWR
VNADGTVVAVESGLCLDVSGFGTANGTAVQLWNCTGADNQKWTGLSGATNSCPLPSTYRW
TSTGPLAQPANGWYSLKDFTTVTYNGKHLVYATNATADGWRSMMVSPFTNWSDMASAGQT
QTSQLAVAPRLFYFAPKNIWVLISNGWGTNWPFAYRTSSDPTNPNGWSAPQALFTGSLPA
GSKGSLIDPTIIGDGQNMVLFFADDAGSIYKSTMPIGNFPSSFGSSYTTVMKDTEDKLFE
AVEVYKVQGQNQYLMIVEAKGNNGRYFRSFTASSLNGPWTEQAGSESSPFAGKANSGATW
TNDISHGDLVRNNPDQTMTIDPCNLQFLYQGRDPNANDPDYLKLPYRPGLLTLQR
Download sequence
Identical sequences C9YYV2
gi|290956786|ref|YP_003487968.1| WP_013000106.1.11737 WP_013000106.1.12502 WP_013000106.1.15999 WP_013000106.1.2165 WP_013000106.1.21818 WP_013000106.1.32552 WP_013000106.1.57887 WP_013000106.1.82449 WP_013000106.1.93747 WP_013000106.1.94791

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]