SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_013774451.1.79799 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_013774451.1.79799
Domain Number 1 Region: 5-246
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 6.28e-48
Family ABC transporter ATPase domain-like 0.003
Further Details:      
 
Domain Number 2 Region: 311-534
Classification Level Classification E-value
Superfamily P-loop containing nucleoside triphosphate hydrolases 1.49e-41
Family ABC transporter ATPase domain-like 0.0011
Further Details:      
 
Weak hits

Sequence:  WP_013774451.1.79799
Domain Number - Region: 577-636
Classification Level Classification E-value
Superfamily tRNA-binding arm 0.0162
Family Valyl-tRNA synthetase (ValRS) C-terminal domain 0.035
Further Details:      
 
Domain Number - Region: 530-590
Classification Level Classification E-value
Superfamily Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0235
Family Lissencephaly-1 protein (Lis-1, PAF-AH alpha) N-terminal domain 0.0052
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_013774451.1.79799
Sequence length 645
Comment multidrug ABC transporter ATP-binding protein [Melissococcus plutonius]; AA=GCF_001047405.1; RF=na; TAX=33970; STAX=33970; NAME=Melissococcus plutonius; strain=B5; AL=Contig; RT=Major
Sequence
MILLQANRVSRYFGAETLFENVQMEIHKNSRIALVGRNGAGKSTLLKMIAGVELPDGGQI
TKSKTVTLGYLAQNAGFDSKKTIWEEMKQAFHLLIQMEDRIHELEQLISQTTDTVNLDRI
MKEYDQLQQTFLEKNGYGYENDIRSILHGFGFYEDSYHKPINTLSGGQKTRLALVRMLLQ
KPDILVLDEPTNHLDIETLAWLETYLSSYTGALLIVSHDRYFLDKIVTEVYELSRKKLNY
YKGNYSDYLKLKAGQLEADWKAYQKQQAEINKLEDFVARNLARASTTKRAQSRQKALEKM
DRMERPIGDEKSAHFLFDFDKASGNVVLQVKDAAIGYNKQQILADSINIDINKQDAIALV
GPNGIGKSTLLKSIMDQLPFIKGIKILGTNVSIGYYDQEQANLTSSQTVLEELWSEHSTV
PETEIRKVLGSFLFSGEDVEKTIPLLSGGEKARVALAKLAMNKNNFLILDEPTNHLDIDS
KEVLENALIDYEGTLLFVSHDRYFINRVATKVIDLSENGCKLYLGDYDYYLEKKKEEEEI
AELLGKQSLIDVPVDTPTKNDFYLQKEQQKIVRSLQRKITQIEEELTELEERIDQLQIEL
VNPVFMDDAPALTELTEKLSNYQHKQEDLLDEWENLSLELEEQQT
Download sequence
Identical sequences F3YBY7
WP_013774451.1.100587 WP_013774451.1.20434 WP_013774451.1.28973 WP_013774451.1.41601 WP_013774451.1.43707 WP_013774451.1.6342 WP_013774451.1.63594 WP_013774451.1.73366 WP_013774451.1.79153 WP_013774451.1.79799 WP_013774451.1.82989 WP_013774451.1.90619 WP_013774451.1.97133 gi|332687050|ref|YP_004456824.1|

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]