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Domain assignment for WP_014436407.1.29391 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  WP_014436407.1.29391
Domain Number - Region: 177-203
Classification Level Classification E-value
Superfamily TAF(II)230 TBP-binding fragment 0.0785
Family TAF(II)230 TBP-binding fragment 0.0088
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_014436407.1.29391
Sequence length 530
Comment RNA polymerase sigma-54 factor [Phycisphaera mikurensis]; AA=GCF_000284115.1; RF=representative genome; TAX=1142394; STAX=547188; NAME=Phycisphaera mikurensis NBRC 102666; strain=NBRC 102666; AL=Complete Genome; RT=Major
Sequence
MHLSVGNHVRMGQQMKLAPRMIQSMEILQMPQAQLEERIELELASNPTLELQEPGADAEG
LRDAMAQERRDDREHTRELVVGGADGAPGAGESAADFERLDNLSEQYGDAWSNTLESGEG
RLSDRSERFLSGPGPSSYAGERDGKMDAMANSPAKMASLYEQLMGQWRMAQADDNLDERL
FDLGEYLIGNIDADGYLRADPEQLRDAAPAKLGDVSAEEVDEAIEILQMALDPAGIAARS
LAECILLQIDAKRRDPDADRDLLDLQEVLIRDHLKDIEINRFPRMVEATGRGLGELKHAV
ARLRAYSPHPGRNLADPVTRTITPDAVITYDELTDTYTALLTSGRLPALQISADYEDLAK
DKTQEKAARDFVGRQLRSARWLLDAIRQRQHTLLRVIGVVINAQRGWFEQGDAGLVPLPM
TLVADQLGIHVATVSRAVSEKYLQTPRGIVPLRMFFSGGTQSAGGDDVSWTAVQAKLKEV
IDDEDKTEPLSDDELVEALGERGITIARRTVAKYRGQLGIGTKRQRREFV
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Identical sequences I0ID50
gi|383766104|ref|YP_005445085.1| WP_014436407.1.29391

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