SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for WP_015173748.1.54702 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  WP_015173748.1.54702
Domain Number 1 Region: 4-236
Classification Level Classification E-value
Superfamily Ribulose-phoshate binding barrel 3.33e-67
Family Decarboxylase 0.0000127
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_015173748.1.54702
Sequence length 239
Comment orotidine-5'-phosphate decarboxylase [Geitlerinema sp. PCC 7407]; AA=GCF_000317045.1; RF=na; TAX=1173025; STAX=1173025; NAME=Geitlerinema sp. PCC 7407; strain=PCC 7407; AL=Complete Genome; RT=Major
Sequence
MSSMADRIIVPLDVPTEAAAIALLDRLPQVGFWKVGLELFVSSGPSILTVLKERDKRIFL
DLKFHDIPNTVKGACHAAGRYGVDLLTVHAANGKEGLRWAKEAAEAGALETGVLAPRLLA
ITLLTSINARTLAFDLKVPLELPEYVLNMALLAQESGIDGAVCSPQEVQQLRSMCENDFL
LVCPGVRPSWAETGDQKRTMTPAEAVKAGANYLVIGRPITAAPDPAEAFGRICDEMASV
Download sequence
Identical sequences K9SEI0
gi|428227139|ref|YP_007111236.1| WP_015173748.1.54702

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]