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Domain assignment for WP_017710748.1.55858 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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No Significant Hits.

Weak hits

Sequence:  WP_017710748.1.55858
Domain Number - Region: 1246-1292
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 0.0132
Family Retrovirus capsid protein C-terminal domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) WP_017710748.1.55858
Sequence length 1296
Comment magnesium chelatase subunit H [Prochlorothrix hollandica]; AA=GCF_000332315.1; RF=representative genome; TAX=317619; STAX=1223; NAME=Prochlorothrix hollandica PCC 9006 = CALU 1027; strain=PCC 9006; AL=Scaffold; RT=Major
Sequence
MAKIVLITGFEAFNASLYRQAADRAQARCPGLEILTFSDRDLVPQAEAIAAALQEADVFF
ASLIFDYDQVLWLRERVQQIPIRLVFESALELMSLTRIGKFVIGDKPKGMPKPVQFILSK
FGGSQREEDKLAGYLSFLKIGPKLLKFVPVGKVQDLRNWLIIYGYWNAGGTDNVASMLWI
LGEKYLKLTVGDIPPVLETPNMGLLHPDYGGYFTSPQAYLTWYYNRPSGLGDPVAGPASA
PSLAPSLAPSLAPSIAPAGTFAWGETDRPVIALLLYRKHVITQQPYIAQLIRQVEAAGLV
PLPVFINGVEGHVVVRDWLTTSHEQQQRHQGMKANLSLSPEAVTVDLIVSTIGFPLVGGP
AGSMEAGRQVEVAKAILTSKNVPYLVAAPLLIQDIASWTRQGIGGLQSVVLYALPELDGA
IDTIPLGGLVGDDIYLVPERVQRLLGRVQHWVNLRRKAKADRKLAVILYGFPPGYGATGT
AALLNVPQSLMNLLQGLRDQGYDLGDPSQWPQDGEDLIRRVKAADEATPADRPDLDTVSP
QTLHQWLGYLHTHRIEKQWQSLTGTGLKTYGDQLLVGGVQLGKVWIGVQPPLGLAGDPMR
LMFERDLTPHPQYAAFYQWLQHQFQADAVVHFGMHGTVEWLPGSPLGNTGYSWSDILLGN
LPNLYLYAANNPSESILAKRRGYGTLISHNVPPYGRAGLYKELVNLRELIGEYREDPEVN
AVLKEGICKLILDTGLEADCPFPEAQHLGIAFSPETVNLFSVHAFNQYLLTVYEYLQVLE
NRLFSSGLHVLGQKPHPEQLETYLEAYFGDKLPAAALRALCYQPDQLQPWLGDQGASLKR
RLGEVDAEPAIVALTAIIQEAESIRDLLHQTPDEISNLLRGLNGEYIPPAPGGDLLRDGP
GVLPTGRNIHALDPYRMPSPAAYERGRAIGRQIIDQHLQGEGTYPETVAVMLWGLDAIKT
KGESLGILLELVGAEPLKEGTGRIVRYELRPLETLGHPRIDVLGNLSGIFRDSFVNVIEL
LDDLFVRAAAAPEPDDQNFIRKHALALQAQGVENASARLFSNPAGDFGSLVNDRITDSNW
ESGDELGATWQGRNSFSYGRGDKGQARPEVLQTLLQTTDRIIQQIDSVEYGLTDIQEYYA
NTGGLKKAAELKRGGKKTTASFVESFSKDTTPRPLEDLLRLEYRTKLLNPKWADAMVAQG
SGGAYEVSQRMTALMGWAGTADFKENWVYDQAAATYALDPEMAAKLNQANPEAFRNIVGR
MLEAHGRGFWNPEADVLQQLRLLYEQTEEELEGITV
Download sequence
Identical sequences WP_017710748.1.55858

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