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Domain assignment for WP_018896512.1.28702 from NCBI 2017_08 genome

Domain architecture


Domain assignment details

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Strong hits

Sequence:  WP_018896512.1.28702
Domain Number 1 Region: 1361-1611
Classification Level Classification E-value
Superfamily Terpenoid cyclases/Protein prenyltransferases 6.73e-47
Family Complement components 0.0067
Further Details:      
 
Domain Number 2 Region: 42-82
Classification Level Classification E-value
Superfamily Hairpin loop containing domain-like 0.0000112
Family Hairpin loop containing domain 0.07
Further Details:      
 
Domain Number 3 Region: 136-256
Classification Level Classification E-value
Superfamily TPR-like 0.0000664
Family Tetratricopeptide repeat (TPR) 0.016
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) WP_018896512.1.28702
Sequence length 1824
Comment membrane protein [Rhizobium sp. 2MFCol3.1]; AA=GCF_000377565.1; RF=na; TAX=1246459; STAX=1246459; NAME=Rhizobium sp. 2MFCol3.1; strain=2MFCol3.1; AL=Scaffold; RT=Major
Sequence
MFARAFLTAITVVLSTALIGSPAFSADSKRQIQTVRDADYFGFDLRSEQNVTLDQCKASC
IGDKSCKAFTYNPKASWCFLKSDFKTMNAFPGAIAGKIVEAAGSQEPDLGAAPRIGFLSG
DVLQQARDDKANLELADDQQGQSADSLIANARIDLTASNVVDALKSFRGALALTPDNADL
WLETARAGDSFVKTDDNNGSDIYAQAVLAAINGYDLTRTTTSRADALAVLAVALEKNANY
RAALNAYKASLALVNSKEVQAAYLQLKSTQGFRITDHTVDADSVTPRACVTFSESLVKTT
DYTPFVTLNGASPKALETKDRQICVEGLTHGENYKISFRTGLPSSVDEVLEAPVSLDIYV
KDRTASVRFTGDSFVLPSTARRGIPIVSVNMASANLKLYRIGDRGIAPLLTSSQFLTQLD
GYSAQRIEDESGELVWQGAIDIANDLNKDVVTSFPVDEALPERKPGVYVLTATSTTGPDQ
EWNSQATQWFVVSDIGVTTYAGTDGLNVFARSLASAKPMAGVALQLLAKNNEVLGTATTD
DNGRATFTAGLIRGTSALTPAVITAKNGTSDYVFLDMTRAGFDLSDRGVTGRASPGAIDV
LTFTERGIYRVGETVHASALARDTDGKAIENLPLTFIFMRPDGVEDRRIVSQTSNLGGYN
VDFAVQDNAMRGTWTMNIHTDPKGSPIASKSFLVDDFVPDRTDMELKTEAKVIGPDTPAT
INISGKYLYGAPAAGLTLEGDVVIKPTRQADAFPGYFFGLADEEASEDSRQSIEGLPDLD
EKGEGVTDLTVGELPATTQLLNATVYIRMQEAGGRAIERSLVLPVQNQGPMIGIKPEFSG
DLGENSIANFTVIGVSADGAKEEMKGLRWKLFKLNRDYQWYRDGTAWKYDPVYTAEQVGN
GNVDAGVDGAKIASPVQWGRYRLEVESTDADGPTSSVEFDAGWFVQATSTETPDGLEIAL
DKDSYKVGETAKLKVSSRYAGELMIAAGTETLVAVQNAAIGETGGEVDIPVTADWGAGAY
VTATLFRPGDAQDSHMPMRAIGVKWLKVDPEDRALQVKIEAPEKMLPRGPLPITLAVAGA
GANEDAYVTVAAVDVGILNLTRYEPPNPEEWYFGQRQLGLEIRDLYGRLIDGSLGATGKL
RTGGDGGAIALQASPPTQKLVAFFSGPLKLDAEGKAHVSFDIPQFNGTARLMAVAWSKSG
VGHATQDVIIRDPVVVTASLPRFLAPGDKSELRLDIANTDAPAGDYKLAVTGNNSVGIDK
ATQTIRLDAGAKQAVTLAVTGLQPGNGVVSINLSDAAGLSLDQSLDVPVRPAVLPVTERR
VLALKPGAKLTIDKALLADSVLPGASVSVNVTRSAAFDIPALLMSLDRYPFGCAEQTTSR
ALPLLYLSELAEQVGLDGDADIKKRVQDAIYRVLSYQASAGSFGLWGPDSGDLWLDSYVT
DFLTRAREQKYDVPDRALAQALENLQNALSYDVNVKDQGDQIAYALYVLARNKKAAVSDL
RYYADTMINDFPTPLAKAHIAAALALYGDATRSKNIFVDALQMSAQSMVTKVNLSRTDYG
SVLRDGAAILALAAESRPVPPIVPELAKAVAKEWERSKYTSTQEQAWMLLAARAIQGGDD
SLKIDVNGALHNGAYMARMNGEALADHALTLTNQTSDAVSAVVTTVAAPVTPLPAGGDGF
AIERSYYTLDGEEANVSEAKQNERYVVVLHVTESNKWPSRIVITDLLPAGFQIDNPSLVD
SAQLTNFDWIGDVTAAHTEFRNDRFVAAFNRSADDNREINVAYVVRAVTPGVYDHPAANV
EDMYRPQLSARTATGKMEVVAAQP
Download sequence
Identical sequences WP_018896512.1.28702

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